Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC19.43■□□□□ 0.7
MS4A1P11836 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
MS4A1P11836 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.43■□□□□ 0.7
MS4A1P11836 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 GNAQP1-201ENST00000444815 1067 ntBASIC19.43■□□□□ 0.7
MS4A1P11836 SPTLC1P1-201ENST00000447199 261 ntBASIC19.43■□□□□ 0.7
MS4A1P11836 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.43■□□□□ 0.7
MS4A1P11836 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.43■□□□□ 0.7
MS4A1P11836 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC19.43■□□□□ 0.7
MS4A1P11836 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.43■□□□□ 0.7
MS4A1P11836 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.43■□□□□ 0.7
MS4A1P11836 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 AC120045.2-201ENST00000567334 178 ntBASIC19.43■□□□□ 0.7
MS4A1P11836 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.43■□□□□ 0.7
MS4A1P11836 AJ011932.1-201ENST00000621707 465 ntBASIC19.43■□□□□ 0.7
MS4A1P11836 AC007431.3-201ENST00000623221 587 ntBASIC19.43■□□□□ 0.7
MS4A1P11836 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MS4A1P11836 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC19.43■□□□□ 0.7
MS4A1P11836 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
MS4A1P11836 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 LINC01230-201ENST00000625222 3017 ntBASIC19.43■□□□□ 0.7
MS4A1P11836 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.42■□□□□ 0.7
MS4A1P11836 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MS4A1P11836 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC19.42■□□□□ 0.7
MS4A1P11836 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A1P11836 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
MS4A1P11836 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MS4A1P11836 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A1P11836 MIR770-201ENST00000390219 98 ntBASIC19.42■□□□□ 0.7
MS4A1P11836 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.42■□□□□ 0.7
MS4A1P11836 AC087499.6-201ENST00000411576 835 ntBASIC19.42■□□□□ 0.7
MS4A1P11836 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.42■□□□□ 0.7
MS4A1P11836 HLA-K-203ENST00000430151 1046 ntBASIC19.42■□□□□ 0.7
MS4A1P11836 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.42■□□□□ 0.7
MS4A1P11836 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC19.42■□□□□ 0.7
MS4A1P11836 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.42■□□□□ 0.7
MS4A1P11836 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC19.42■□□□□ 0.7
MS4A1P11836 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.42■□□□□ 0.7
MS4A1P11836 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC19.42■□□□□ 0.7
MS4A1P11836 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.42■□□□□ 0.7
MS4A1P11836 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MS4A1P11836 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC19.42■□□□□ 0.7
MS4A1P11836 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MS4A1P11836 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MS4A1P11836 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.42■□□□□ 0.7
MS4A1P11836 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A1P11836 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A1P11836 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A1P11836 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A1P11836 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MS4A1P11836 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
MS4A1P11836 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
MS4A1P11836 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC19.41■□□□□ 0.7
MS4A1P11836 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MS4A1P11836 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MS4A1P11836 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC19.41■□□□□ 0.7
MS4A1P11836 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC19.41■□□□□ 0.7
MS4A1P11836 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC19.41■□□□□ 0.7
MS4A1P11836 AC018442.1-201ENST00000421439 2061 ntBASIC19.41■□□□□ 0.7
MS4A1P11836 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.41■□□□□ 0.7
MS4A1P11836 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.41■□□□□ 0.7
MS4A1P11836 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.41■□□□□ 0.7
MS4A1P11836 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.41■□□□□ 0.7
MS4A1P11836 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.41■□□□□ 0.7
MS4A1P11836 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.41■□□□□ 0.7
MS4A1P11836 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
MS4A1P11836 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.41■□□□□ 0.7
MS4A1P11836 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A1P11836 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.41■□□□□ 0.7
MS4A1P11836 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MS4A1P11836 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
MS4A1P11836 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms