Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 TPM3P8-201ENST00000330554 643 ntBASIC17.77■□□□□ 0.44
TOP1P11387 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.77■□□□□ 0.44
TOP1P11387 CD8B2-202ENST00000417670 633 ntBASIC17.77■□□□□ 0.44
TOP1P11387 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.77■□□□□ 0.44
TOP1P11387 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.77■□□□□ 0.44
TOP1P11387 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TOP1P11387 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.77■□□□□ 0.44
TOP1P11387 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.77■□□□□ 0.44
TOP1P11387 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 AC006453.4-201ENST00000636949 1252 ntBASIC17.77■□□□□ 0.44
TOP1P11387 AC008687.7-202ENST00000637404 953 ntBASIC17.77■□□□□ 0.44
TOP1P11387 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.77■□□□□ 0.44
TOP1P11387 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TOP1P11387 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.77■□□□□ 0.44
TOP1P11387 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TOP1P11387 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TOP1P11387 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.77■□□□□ 0.43
TOP1P11387 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.77■□□□□ 0.43
TOP1P11387 AL359258.3-201ENST00000622910 2331 ntBASIC17.77■□□□□ 0.43
TOP1P11387 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TOP1P11387 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TOP1P11387 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.77■□□□□ 0.43
TOP1P11387 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TOP1P11387 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TOP1P11387 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 AC055811.4-201ENST00000624039 1754 ntBASIC17.76■□□□□ 0.43
TOP1P11387 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.76■□□□□ 0.43
TOP1P11387 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TOP1P11387 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.76■□□□□ 0.43
TOP1P11387 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.76■□□□□ 0.43
TOP1P11387 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.76■□□□□ 0.43
TOP1P11387 AC245100.3-201ENST00000441281 285 ntBASIC17.76■□□□□ 0.43
TOP1P11387 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.76■□□□□ 0.43
TOP1P11387 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.76■□□□□ 0.43
TOP1P11387 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.76■□□□□ 0.43
TOP1P11387 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.76■□□□□ 0.43
TOP1P11387 AP000845.1-201ENST00000581677 2131 ntBASIC17.76■□□□□ 0.43
TOP1P11387 ECM1P1-201ENST00000604092 1279 ntBASIC17.76■□□□□ 0.43
TOP1P11387 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.76■□□□□ 0.43
TOP1P11387 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.76■□□□□ 0.43
TOP1P11387 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.76■□□□□ 0.43
TOP1P11387 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.76■□□□□ 0.43
TOP1P11387 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TOP1P11387 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.75■□□□□ 0.43
TOP1P11387 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.75■□□□□ 0.43
TOP1P11387 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
TOP1P11387 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.75■□□□□ 0.43
TOP1P11387 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TOP1P11387 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.75■□□□□ 0.43
TOP1P11387 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.75■□□□□ 0.43
TOP1P11387 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TOP1P11387 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TOP1P11387 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.75■□□□□ 0.43
TOP1P11387 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.75■□□□□ 0.43
TOP1P11387 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.75■□□□□ 0.43
TOP1P11387 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.75■□□□□ 0.43
TOP1P11387 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.75■□□□□ 0.43
TOP1P11387 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.75■□□□□ 0.43
TOP1P11387 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.75■□□□□ 0.43
TOP1P11387 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.75■□□□□ 0.43
TOP1P11387 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.75■□□□□ 0.43
TOP1P11387 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.75■□□□□ 0.43
TOP1P11387 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TOP1P11387 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TOP1P11387 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms