Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CALM3P0DP25 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 FAM8A4P-201ENST00000435433 1213 ntBASIC17.5■□□□□ 0.39
CALM3P0DP25 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.5■□□□□ 0.39
CALM3P0DP25 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.5■□□□□ 0.39
CALM3P0DP25 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.5■□□□□ 0.39
CALM3P0DP25 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.5■□□□□ 0.39
CALM3P0DP25 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.5■□□□□ 0.39
CALM3P0DP25 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.5■□□□□ 0.39
CALM3P0DP25 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.5■□□□□ 0.39
CALM3P0DP25 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.5■□□□□ 0.39
CALM3P0DP25 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.5■□□□□ 0.39
CALM3P0DP25 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 SALL4P5-201ENST00000419001 1760 ntBASIC17.5■□□□□ 0.39
CALM3P0DP25 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CALM3P0DP25 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CALM3P0DP25 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.5■□□□□ 0.39
CALM3P0DP25 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.5■□□□□ 0.39
CALM3P0DP25 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CALM3P0DP25 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CALM3P0DP25 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.49■□□□□ 0.39
CALM3P0DP25 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 FKBP4P6-201ENST00000457486 1332 ntBASIC17.49■□□□□ 0.39
CALM3P0DP25 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.49■□□□□ 0.39
CALM3P0DP25 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 AP000593.2-201ENST00000542775 1433 ntBASIC17.49■□□□□ 0.39
CALM3P0DP25 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.49■□□□□ 0.39
CALM3P0DP25 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CALM3P0DP25 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.49■□□□□ 0.39
CALM3P0DP25 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.49■□□□□ 0.39
CALM3P0DP25 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.49■□□□□ 0.39
CALM3P0DP25 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.49■□□□□ 0.39
CALM3P0DP25 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.49■□□□□ 0.39
CALM3P0DP25 CTBP2P5-201ENST00000454986 1264 ntBASIC17.49■□□□□ 0.39
CALM3P0DP25 AC104989.1-201ENST00000519711 778 ntBASIC17.49■□□□□ 0.39
CALM3P0DP25 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.49■□□□□ 0.39
CALM3P0DP25 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.49■□□□□ 0.39
CALM3P0DP25 AC106820.3-201ENST00000561653 397 ntBASIC17.49■□□□□ 0.39
CALM3P0DP25 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.49■□□□□ 0.39
CALM3P0DP25 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.49■□□□□ 0.39
CALM3P0DP25 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.49■□□□□ 0.39
CALM3P0DP25 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CALM3P0DP25 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CALM3P0DP25 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CALM3P0DP25 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALM3P0DP25 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.48■□□□□ 0.39
CALM3P0DP25 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALM3P0DP25 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALM3P0DP25 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALM3P0DP25 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALM3P0DP25 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALM3P0DP25 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALM3P0DP25 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CALM3P0DP25 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALM3P0DP25 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.48■□□□□ 0.39
CALM3P0DP25 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.48■□□□□ 0.39
CALM3P0DP25 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CALM3P0DP25 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALM3P0DP25 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALM3P0DP25 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALM3P0DP25 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CALM3P0DP25 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CALM3P0DP25 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.48■□□□□ 0.39
CALM3P0DP25 MIR1909-201ENST00000411312 80 ntBASIC17.48■□□□□ 0.39
CALM3P0DP25 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CALM3P0DP25 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CALM3P0DP25 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms