Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
MMP2P08253 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MMP2P08253 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.15■□□□□ 0.02
MMP2P08253 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.15■□□□□ 0.02
MMP2P08253 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MMP2P08253 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
MMP2P08253 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.14■□□□□ 0.01
MMP2P08253 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 PDIA3P1-201ENST00000471856 1510 ntBASIC15.14■□□□□ 0.01
MMP2P08253 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.14■□□□□ 0.01
MMP2P08253 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
MMP2P08253 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
MMP2P08253 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.14■□□□□ 0.01
MMP2P08253 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.14■□□□□ 0.01
MMP2P08253 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 ARSEP1-201ENST00000420443 635 ntBASIC15.14■□□□□ 0.01
MMP2P08253 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.14■□□□□ 0.01
MMP2P08253 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.14■□□□□ 0.01
MMP2P08253 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.14■□□□□ 0.01
MMP2P08253 FTLP10-202ENST00000505798 471 ntBASIC15.14■□□□□ 0.01
MMP2P08253 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.14■□□□□ 0.01
MMP2P08253 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.14■□□□□ 0.01
MMP2P08253 AC131206.1-201ENST00000538078 1211 ntBASIC15.14■□□□□ 0.01
MMP2P08253 KRT17P8-201ENST00000540749 863 ntBASIC15.14■□□□□ 0.01
MMP2P08253 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.14■□□□□ 0.01
MMP2P08253 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.14■□□□□ 0.01
MMP2P08253 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.14■□□□□ 0.01
MMP2P08253 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MMP2P08253 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
MMP2P08253 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.14■□□□□ 0.01
MMP2P08253 AL354702.1-201ENST00000442006 1960 ntBASIC15.14■□□□□ 0.01
MMP2P08253 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.14■□□□□ 0.01
MMP2P08253 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
MMP2P08253 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.14■□□□□ 0.01
MMP2P08253 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MMP2P08253 FKBP4P6-201ENST00000457486 1332 ntBASIC15.14■□□□□ 0.01
MMP2P08253 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.14■□□□□ 0.01
MMP2P08253 AC063926.2-201ENST00000623766 1308 ntBASIC15.14■□□□□ 0.01
MMP2P08253 AC113367.3-201ENST00000508316 1912 ntBASIC15.13■□□□□ 0.01
MMP2P08253 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.13■□□□□ 0.01
MMP2P08253 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
MMP2P08253 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.13■□□□□ 0.01
MMP2P08253 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
MMP2P08253 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.13■□□□□ 0.01
MMP2P08253 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MMP2P08253 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.13■□□□□ 0.01
MMP2P08253 AC007686.3-201ENST00000619017 3487 ntBASIC15.13■□□□□ 0.01
MMP2P08253 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 AC006001.1-201ENST00000325130 474 ntBASIC15.13■□□□□ 0.01
MMP2P08253 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.13■□□□□ 0.01
MMP2P08253 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
MMP2P08253 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 KRT43P-201ENST00000434019 910 ntBASIC15.13■□□□□ 0.01
MMP2P08253 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
MMP2P08253 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
MMP2P08253 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.13■□□□□ 0.01
MMP2P08253 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
MMP2P08253 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MMP2P08253 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.13■□□□□ 0.01
MMP2P08253 AP000812.2-201ENST00000538934 718 ntBASIC15.13■□□□□ 0.01
MMP2P08253 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.13■□□□□ 0.01
MMP2P08253 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
MMP2P08253 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.13■□□□□ 0.01
MMP2P08253 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.13■□□□□ 0.01
MMP2P08253 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.13■□□□□ 0.01
MMP2P08253 AL512343.1-201ENST00000605837 169 ntBASIC15.13■□□□□ 0.01
MMP2P08253 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MMP2P08253 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.13■□□□□ 0.01
MMP2P08253 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
MMP2P08253 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MMP2P08253 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MMP2P08253 AP001267.2-201ENST00000532619 2086 ntBASIC15.13■□□□□ 0.01
MMP2P08253 AC009093.2-202ENST00000620513 2079 ntBASIC15.13■□□□□ 0.01
MMP2P08253 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms