Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
HLA-DQA1P01909 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 AC007787.1-201ENST00000588095 1583 ntBASIC11.43□□□□□ -0.58
HLA-DQA1P01909 BEND3P3-201ENST00000611030 2440 ntBASIC11.43□□□□□ -0.58
HLA-DQA1P01909 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 AC004987.2-201ENST00000395959 1148 ntBASIC11.43□□□□□ -0.58
HLA-DQA1P01909 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 LAGE3P1-201ENST00000425356 484 ntBASIC11.43□□□□□ -0.58
HLA-DQA1P01909 RPS2P1-201ENST00000434010 821 ntBASIC11.43□□□□□ -0.58
HLA-DQA1P01909 FAM197Y8-203ENST00000450145 560 ntBASIC11.43□□□□□ -0.58
HLA-DQA1P01909 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 OR7E14P-202ENST00000530490 1290 ntBASIC11.43□□□□□ -0.58
HLA-DQA1P01909 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 AC021087.4-201ENST00000563761 564 ntBASIC11.43□□□□□ -0.58
HLA-DQA1P01909 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 AL121912.1-201ENST00000603683 238 ntBASIC11.43□□□□□ -0.58
HLA-DQA1P01909 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 AC012508.2-201ENST00000567613 1472 ntBASIC11.43□□□□□ -0.58
HLA-DQA1P01909 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC11.43□□□□□ -0.58
HLA-DQA1P01909 AC004241.5-201ENST00000623870 2448 ntBASIC11.43□□□□□ -0.58
HLA-DQA1P01909 AC019294.4-201ENST00000561777 2905 ntBASIC11.42□□□□□ -0.58
HLA-DQA1P01909 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
HLA-DQA1P01909 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms