Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.55□□□□□ -0.24
ZIC3O60481 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.55□□□□□ -0.24
ZIC3O60481 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ZIC3O60481 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.55□□□□□ -0.24
ZIC3O60481 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.55□□□□□ -0.24
ZIC3O60481 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ZIC3O60481 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ZIC3O60481 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.55□□□□□ -0.24
ZIC3O60481 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ZIC3O60481 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 HOMER2P2-201ENST00000451621 847 ntBASIC13.55□□□□□ -0.24
ZIC3O60481 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ZIC3O60481 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.55□□□□□ -0.24
ZIC3O60481 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.55□□□□□ -0.24
ZIC3O60481 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.55□□□□□ -0.24
ZIC3O60481 ZACNP1-201ENST00000612259 710 ntBASIC13.55□□□□□ -0.24
ZIC3O60481 AC009542.2-202ENST00000619004 1067 ntBASIC13.55□□□□□ -0.24
ZIC3O60481 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 TUBB1P2-201ENST00000422712 1306 ntBASIC13.55□□□□□ -0.24
ZIC3O60481 TUBB1P1-201ENST00000503144 1300 ntBASIC13.55□□□□□ -0.24
ZIC3O60481 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ZIC3O60481 KRT8P4-201ENST00000509735 1454 ntBASIC13.55□□□□□ -0.24
ZIC3O60481 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 DBET-201ENST00000630918 3363 ntBASIC13.54□□□□□ -0.24
ZIC3O60481 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZIC3O60481 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.54□□□□□ -0.24
ZIC3O60481 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.54□□□□□ -0.24
ZIC3O60481 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 SALL4P5-201ENST00000419001 1760 ntBASIC13.54□□□□□ -0.24
ZIC3O60481 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZIC3O60481 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZIC3O60481 RN7SKP175-201ENST00000408472 289 ntBASIC13.54□□□□□ -0.24
ZIC3O60481 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.54□□□□□ -0.24
ZIC3O60481 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.54□□□□□ -0.24
ZIC3O60481 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.54□□□□□ -0.24
ZIC3O60481 CHMP1AP1-201ENST00000445563 662 ntBASIC13.54□□□□□ -0.24
ZIC3O60481 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.54□□□□□ -0.24
ZIC3O60481 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
ZIC3O60481 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.54□□□□□ -0.24
ZIC3O60481 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.54□□□□□ -0.24
ZIC3O60481 AP006547.1-201ENST00000563435 692 ntBASIC13.54□□□□□ -0.24
ZIC3O60481 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.54□□□□□ -0.24
ZIC3O60481 MIR4741-201ENST00000579822 90 ntBASIC13.54□□□□□ -0.24
ZIC3O60481 PPY2P-201ENST00000582808 702 ntBASIC13.54□□□□□ -0.24
ZIC3O60481 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.54□□□□□ -0.24
ZIC3O60481 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZIC3O60481 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
ZIC3O60481 AC068587.6-202ENST00000641839 5619 ntBASIC13.54□□□□□ -0.24
ZIC3O60481 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZIC3O60481 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZIC3O60481 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.54□□□□□ -0.24
ZIC3O60481 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 AC009093.2-202ENST00000620513 2079 ntBASIC13.54□□□□□ -0.24
ZIC3O60481 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 CICP23-201ENST00000605013 2741 ntBASIC13.54□□□□□ -0.24
ZIC3O60481 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ZIC3O60481 REXO1L6P-201ENST00000603433 1515 ntBASIC13.54□□□□□ -0.24
ZIC3O60481 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ZIC3O60481 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms