Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN9O14815 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN9O14815 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 WASH3P-207ENST00000560956 1394 ntBASIC16.03■□□□□ 0.16
CAPN9O14815 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.03■□□□□ 0.16
CAPN9O14815 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CAPN9O14815 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN9O14815 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CAPN9O14815 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN9O14815 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 AC104457.1-201ENST00000401024 814 ntBASIC16.03■□□□□ 0.16
CAPN9O14815 TTTY23B-201ENST00000442790 549 ntBASIC16.03■□□□□ 0.16
CAPN9O14815 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN9O14815 KRT18P25-201ENST00000508931 1278 ntBASIC16.03■□□□□ 0.16
CAPN9O14815 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN9O14815 PTP4A1P2-201ENST00000546033 454 ntBASIC16.03■□□□□ 0.16
CAPN9O14815 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN9O14815 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 CLUHP6-201ENST00000580789 941 ntBASIC16.03■□□□□ 0.16
CAPN9O14815 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN9O14815 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN9O14815 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.03■□□□□ 0.16
CAPN9O14815 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CAPN9O14815 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CAPN9O14815 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CAPN9O14815 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN9O14815 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CAPN9O14815 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.03■□□□□ 0.16
CAPN9O14815 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CAPN9O14815 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CAPN9O14815 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CAPN9O14815 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN9O14815 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN9O14815 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN9O14815 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN9O14815 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CAPN9O14815 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN9O14815 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN9O14815 AC139749.1-202ENST00000617529 3139 ntBASIC16.02■□□□□ 0.16
CAPN9O14815 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN9O14815 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.02■□□□□ 0.16
CAPN9O14815 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN9O14815 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN9O14815 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN9O14815 MROH4P-201ENST00000431302 1578 ntBASIC16.02■□□□□ 0.16
CAPN9O14815 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CAPN9O14815 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.02■□□□□ 0.16
CAPN9O14815 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN9O14815 ACTG1P3-201ENST00000431775 1114 ntBASIC16.02■□□□□ 0.16
CAPN9O14815 GPR53P-205ENST00000457298 1084 ntBASIC16.02■□□□□ 0.16
CAPN9O14815 AC093433.1-201ENST00000458048 571 ntBASIC16.02■□□□□ 0.16
CAPN9O14815 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CAPN9O14815 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.02■□□□□ 0.16
CAPN9O14815 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CAPN9O14815 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.02■□□□□ 0.16
CAPN9O14815 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.16
CAPN9O14815 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN9O14815 AP005019.2-201ENST00000615104 511 ntBASIC16.02■□□□□ 0.16
CAPN9O14815 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CAPN9O14815 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.02■□□□□ 0.16
CAPN9O14815 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CAPN9O14815 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN9O14815 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.02■□□□□ 0.15
CAPN9O14815 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.02■□□□□ 0.15
CAPN9O14815 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN9O14815 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN9O14815 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN9O14815 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN9O14815 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.02■□□□□ 0.15
CAPN9O14815 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN9O14815 AC091951.1-201ENST00000512854 2465 ntBASIC16.02■□□□□ 0.15
CAPN9O14815 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.02■□□□□ 0.15
CAPN9O14815 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN9O14815 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CAPN9O14815 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CAPN9O14815 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN9O14815 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN9O14815 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CAPN9O14815 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN9O14815 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPN9O14815 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPN9O14815 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CAPN9O14815 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CAPN9O14815 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms