Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19.2■□□□□ 0.66
CHL1O00533 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 AC103988.2-201ENST00000561804 725 ntBASIC19.2■□□□□ 0.66
CHL1O00533 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.2■□□□□ 0.66
CHL1O00533 AC243960.2-201ENST00000600996 747 ntBASIC19.2■□□□□ 0.66
CHL1O00533 AC244093.1-201ENST00000610837 814 ntBASIC19.2■□□□□ 0.66
CHL1O00533 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC19.2■□□□□ 0.66
CHL1O00533 AC027601.3-201ENST00000622907 509 ntBASIC19.2■□□□□ 0.66
CHL1O00533 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.2■□□□□ 0.66
CHL1O00533 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.2■□□□□ 0.66
CHL1O00533 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHL1O00533 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC19.19■□□□□ 0.66
CHL1O00533 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CHL1O00533 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHL1O00533 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC19.19■□□□□ 0.66
CHL1O00533 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHL1O00533 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHL1O00533 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHL1O00533 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHL1O00533 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CHL1O00533 DPM3-202ENST00000368399 517 ntBASIC19.19■□□□□ 0.66
CHL1O00533 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.19■□□□□ 0.66
CHL1O00533 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.19■□□□□ 0.66
CHL1O00533 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC19.19■□□□□ 0.66
CHL1O00533 AP001258.2-201ENST00000529891 490 ntBASIC19.19■□□□□ 0.66
CHL1O00533 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC19.19■□□□□ 0.66
CHL1O00533 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.19■□□□□ 0.66
CHL1O00533 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHL1O00533 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.19■□□□□ 0.66
CHL1O00533 AL023803.2-201ENST00000620080 638 ntBASIC19.19■□□□□ 0.66
CHL1O00533 Z98259.2-201ENST00000641583 609 ntBASIC19.19■□□□□ 0.66
CHL1O00533 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CHL1O00533 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.19■□□□□ 0.66
CHL1O00533 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHL1O00533 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHL1O00533 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHL1O00533 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHL1O00533 AC092135.3-201ENST00000624151 1846 ntBASIC19.18■□□□□ 0.66
CHL1O00533 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.18■□□□□ 0.66
CHL1O00533 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHL1O00533 TNRC18P2-201ENST00000417666 2714 ntBASIC19.18■□□□□ 0.66
CHL1O00533 CICP14-201ENST00000629111 2732 ntBASIC19.18■□□□□ 0.66
CHL1O00533 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.18■□□□□ 0.66
CHL1O00533 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHL1O00533 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC19.18■□□□□ 0.66
CHL1O00533 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHL1O00533 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHL1O00533 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHL1O00533 F10-203ENST00000409306 1450 ntTSL 3 BASIC19.18■□□□□ 0.66
CHL1O00533 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHL1O00533 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHL1O00533 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHL1O00533 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHL1O00533 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.18■□□□□ 0.66
CHL1O00533 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHL1O00533 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.18■□□□□ 0.66
CHL1O00533 NKAIN1P1-201ENST00000435754 582 ntBASIC19.18■□□□□ 0.66
CHL1O00533 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.18■□□□□ 0.66
CHL1O00533 RNMTL1P1-201ENST00000454103 560 ntBASIC19.18■□□□□ 0.66
CHL1O00533 TUBB8P8-201ENST00000458717 1058 ntBASIC19.18■□□□□ 0.66
CHL1O00533 SERPINA13P-202ENST00000478994 924 ntBASIC19.18■□□□□ 0.66
CHL1O00533 AC099548.2-209ENST00000480264 625 ntBASIC19.18■□□□□ 0.66
CHL1O00533 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.18■□□□□ 0.66
CHL1O00533 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHL1O00533 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.18■□□□□ 0.66
CHL1O00533 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CHL1O00533 AL451050.2-201ENST00000606967 682 ntBASIC19.18■□□□□ 0.66
CHL1O00533 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHL1O00533 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.18■□□□□ 0.66
CHL1O00533 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.18■□□□□ 0.66
CHL1O00533 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.18■□□□□ 0.66
CHL1O00533 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHL1O00533 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC19.18■□□□□ 0.66
CHL1O00533 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CHL1O00533 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms