Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 GRK6P1-201ENST00000400595 1711 ntBASIC12.2□□□□□ -0.46
SRRM4A7MD48 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 AC098850.1-201ENST00000419919 790 ntBASIC12.19□□□□□ -0.46
SRRM4A7MD48 AC134915.1-201ENST00000426461 574 ntBASIC12.19□□□□□ -0.46
SRRM4A7MD48 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 SERBP1P5-201ENST00000510079 1181 ntBASIC12.19□□□□□ -0.46
SRRM4A7MD48 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 AC055876.2-201ENST00000531834 546 ntBASIC12.19□□□□□ -0.46
SRRM4A7MD48 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 AC120045.2-201ENST00000567334 178 ntBASIC12.19□□□□□ -0.46
SRRM4A7MD48 SPDYE22P-201ENST00000582158 798 ntBASIC12.19□□□□□ -0.46
SRRM4A7MD48 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 AC099568.2-201ENST00000609194 695 ntBASIC12.19□□□□□ -0.46
SRRM4A7MD48 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 INTS4P2-202ENST00000614726 2019 ntBASIC12.19□□□□□ -0.46
SRRM4A7MD48 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 BX640514.1-201ENST00000583223 1918 ntBASIC12.19□□□□□ -0.46
SRRM4A7MD48 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
SRRM4A7MD48 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SRRM4A7MD48 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 AC097376.2-205ENST00000610159 5334 ntBASIC12.18□□□□□ -0.46
SRRM4A7MD48 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 NUS1P3-201ENST00000423502 862 ntBASIC12.18□□□□□ -0.46
SRRM4A7MD48 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 AC104596.2-201ENST00000512793 793 ntBASIC12.18□□□□□ -0.46
SRRM4A7MD48 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.18□□□□□ -0.46
SRRM4A7MD48 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 AC009118.2-201ENST00000613275 655 ntBASIC12.18□□□□□ -0.46
SRRM4A7MD48 BX539320.1-201ENST00000623759 877 ntBASIC12.18□□□□□ -0.46
SRRM4A7MD48 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SRRM4A7MD48 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms