Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 FAM185BP-201ENST00000443595 716 ntBASIC13.18□□□□□ -0.3
HMX3A6NHT5 AC009078.2-202ENST00000463353 338 ntBASIC13.18□□□□□ -0.3
HMX3A6NHT5 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 CXCL1P1-201ENST00000502804 216 ntBASIC13.18□□□□□ -0.3
HMX3A6NHT5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 UNC93B6-202ENST00000528242 690 ntBASIC13.18□□□□□ -0.3
HMX3A6NHT5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 PCDHB18P-202ENST00000526308 3197 ntBASIC13.18□□□□□ -0.3
HMX3A6NHT5 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 INE2-201ENST00000630399 1874 ntBASIC13.18□□□□□ -0.3
HMX3A6NHT5 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 AL513480.1-201ENST00000451731 511 ntBASIC13.17□□□□□ -0.3
HMX3A6NHT5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 RNA5SP419-201ENST00000515908 135 ntBASIC13.17□□□□□ -0.3
HMX3A6NHT5 RNA5SP415-201ENST00000517246 115 ntBASIC13.17□□□□□ -0.3
HMX3A6NHT5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 SLC25A6P4-201ENST00000586535 553 ntBASIC13.17□□□□□ -0.3
HMX3A6NHT5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.17□□□□□ -0.3
HMX3A6NHT5 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HMX3A6NHT5 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.16□□□□□ -0.3
HMX3A6NHT5 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMX3A6NHT5 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMX3A6NHT5 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.16□□□□□ -0.3
HMX3A6NHT5 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HMX3A6NHT5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMX3A6NHT5 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HMX3A6NHT5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.16□□□□□ -0.3
HMX3A6NHT5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.16□□□□□ -0.3
HMX3A6NHT5 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HMX3A6NHT5 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms