Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 PCDHA3-202ENST00000532566 4594 ntBASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TBC1D3BA6NDS4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 AC011840.2-201ENST00000563063 1520 ntBASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 DPM3-202ENST00000368399 517 ntBASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 Z97180.1-201ENST00000445173 988 ntBASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 UPF3AP2-201ENST00000457924 1132 ntBASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 AC091544.8-201ENST00000619490 361 ntBASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 AC022748.3-201ENST00000621828 275 ntBASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 AC138627.1-207ENST00000641560 1006 ntBASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 AC004923.1-202ENST00000642106 209 ntBASIC15.27■□□□□ 0.04
TBC1D3BA6NDS4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 AC009093.2-202ENST00000620513 2079 ntBASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.27■□□□□ 0.03
TBC1D3BA6NDS4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 AL133466.1-201ENST00000447582 150 ntBASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 BNIP3P13-201ENST00000599968 566 ntBASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 CU633904.3-201ENST00000624042 1029 ntBASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TBC1D3BA6NDS4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms