Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC187A0A096LP49 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 ISCA2P1-201ENST00000425548 448 ntBASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 RCC2P8-201ENST00000502779 1035 ntBASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 AL160314.3-201ENST00000556041 767 ntBASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 AC008825.2-201ENST00000603374 718 ntBASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 AP000346.4-201ENST00000614827 381 ntBASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC187A0A096LP49 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 RTN3P1-201ENST00000536295 711 ntBASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 AC103988.2-201ENST00000561804 725 ntBASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 AC008805.1-201ENST00000590892 364 ntBASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 AC012044.1-201ENST00000603431 297 ntBASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
CCDC187A0A096LP49 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms