Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
UBQLN1Q9UMX0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
UBQLN1Q9UMX0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
UBQLN1Q9UMX0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.82■■□□□ 1.56
UBQLN1Q9UMX0 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.82■■□□□ 1.56
UBQLN1Q9UMX0 AL161729.1-201ENST00000604104 1402 ntBASIC24.82■■□□□ 1.56
UBQLN1Q9UMX0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
UBQLN1Q9UMX0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
UBQLN1Q9UMX0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
UBQLN1Q9UMX0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.81■■□□□ 1.56
UBQLN1Q9UMX0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
UBQLN1Q9UMX0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
UBQLN1Q9UMX0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.81■■□□□ 1.56
UBQLN1Q9UMX0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
UBQLN1Q9UMX0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
UBQLN1Q9UMX0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
UBQLN1Q9UMX0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.8■■□□□ 1.56
UBQLN1Q9UMX0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
UBQLN1Q9UMX0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.8■■□□□ 1.56
UBQLN1Q9UMX0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.8■■□□□ 1.56
UBQLN1Q9UMX0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
UBQLN1Q9UMX0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
UBQLN1Q9UMX0 AC008406.3-201ENST00000620001 1374 ntBASIC24.8■■□□□ 1.56
UBQLN1Q9UMX0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
UBQLN1Q9UMX0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
UBQLN1Q9UMX0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.79■■□□□ 1.56
UBQLN1Q9UMX0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.79■■□□□ 1.56
UBQLN1Q9UMX0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
UBQLN1Q9UMX0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.79■■□□□ 1.56
UBQLN1Q9UMX0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
UBQLN1Q9UMX0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
UBQLN1Q9UMX0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
UBQLN1Q9UMX0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.78■■□□□ 1.56
UBQLN1Q9UMX0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
UBQLN1Q9UMX0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.78■■□□□ 1.56
UBQLN1Q9UMX0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
UBQLN1Q9UMX0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
UBQLN1Q9UMX0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
UBQLN1Q9UMX0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
UBQLN1Q9UMX0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
UBQLN1Q9UMX0 AC131281.2-201ENST00000520478 145 ntBASIC24.77■■□□□ 1.56
UBQLN1Q9UMX0 AC005703.6-201ENST00000623265 1329 ntBASIC24.77■■□□□ 1.56
UBQLN1Q9UMX0 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.77■■□□□ 1.56
UBQLN1Q9UMX0 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.77■■□□□ 1.56
UBQLN1Q9UMX0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
UBQLN1Q9UMX0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
UBQLN1Q9UMX0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBQLN1Q9UMX0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBQLN1Q9UMX0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.76■■□□□ 1.55
UBQLN1Q9UMX0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.76■■□□□ 1.55
UBQLN1Q9UMX0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBQLN1Q9UMX0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBQLN1Q9UMX0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
UBQLN1Q9UMX0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBQLN1Q9UMX0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
UBQLN1Q9UMX0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBQLN1Q9UMX0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.75■■□□□ 1.55
UBQLN1Q9UMX0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.75■■□□□ 1.55
UBQLN1Q9UMX0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBQLN1Q9UMX0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBQLN1Q9UMX0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.75■■□□□ 1.55
UBQLN1Q9UMX0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.75■■□□□ 1.55
UBQLN1Q9UMX0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
UBQLN1Q9UMX0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
UBQLN1Q9UMX0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
UBQLN1Q9UMX0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.74■■□□□ 1.55
UBQLN1Q9UMX0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
UBQLN1Q9UMX0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.73■■□□□ 1.55
UBQLN1Q9UMX0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
UBQLN1Q9UMX0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
UBQLN1Q9UMX0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
UBQLN1Q9UMX0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
UBQLN1Q9UMX0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
UBQLN1Q9UMX0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
UBQLN1Q9UMX0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.73■■□□□ 1.55
UBQLN1Q9UMX0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.73■■□□□ 1.55
UBQLN1Q9UMX0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
UBQLN1Q9UMX0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
UBQLN1Q9UMX0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
UBQLN1Q9UMX0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
UBQLN1Q9UMX0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
UBQLN1Q9UMX0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.72■■□□□ 1.55
UBQLN1Q9UMX0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
UBQLN1Q9UMX0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.72■■□□□ 1.55
UBQLN1Q9UMX0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.71■■□□□ 1.55
UBQLN1Q9UMX0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
UBQLN1Q9UMX0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.71■■□□□ 1.55
UBQLN1Q9UMX0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.71■■□□□ 1.55
UBQLN1Q9UMX0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
UBQLN1Q9UMX0 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.71■■□□□ 1.55
UBQLN1Q9UMX0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
UBQLN1Q9UMX0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
UBQLN1Q9UMX0 AC135731.1-201ENST00000569415 2548 ntBASIC24.7■■□□□ 1.54
UBQLN1Q9UMX0 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
UBQLN1Q9UMX0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
UBQLN1Q9UMX0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
UBQLN1Q9UMX0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.7■■□□□ 1.54
UBQLN1Q9UMX0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.7■■□□□ 1.54
UBQLN1Q9UMX0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
UBQLN1Q9UMX0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms