Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NOTCH3Q9UM47 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NOTCH3Q9UM47 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NOTCH3Q9UM47 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.61■□□□□ 0.41
NOTCH3Q9UM47 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NOTCH3Q9UM47 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NOTCH3Q9UM47 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.61■□□□□ 0.41
NOTCH3Q9UM47 AL136162.1-201ENST00000607711 1078 ntBASIC17.61■□□□□ 0.41
NOTCH3Q9UM47 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NOTCH3Q9UM47 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.61■□□□□ 0.41
NOTCH3Q9UM47 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 MIR6821-201ENST00000617625 74 ntBASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 AL136967.2-201ENST00000623968 743 ntBASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NOTCH3Q9UM47 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.59■□□□□ 0.41
NOTCH3Q9UM47 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NOTCH3Q9UM47 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.59■□□□□ 0.41
NOTCH3Q9UM47 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NOTCH3Q9UM47 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.59■□□□□ 0.41
NOTCH3Q9UM47 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.59■□□□□ 0.41
NOTCH3Q9UM47 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NOTCH3Q9UM47 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NOTCH3Q9UM47 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NOTCH3Q9UM47 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NOTCH3Q9UM47 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NOTCH3Q9UM47 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NOTCH3Q9UM47 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NOTCH3Q9UM47 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NOTCH3Q9UM47 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NOTCH3Q9UM47 SRD5A1P1-201ENST00000442297 786 ntBASIC17.58■□□□□ 0.41
NOTCH3Q9UM47 AC091305.1-201ENST00000479476 895 ntBASIC17.58■□□□□ 0.41
NOTCH3Q9UM47 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NOTCH3Q9UM47 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
NOTCH3Q9UM47 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.58■□□□□ 0.4
NOTCH3Q9UM47 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.58■□□□□ 0.4
NOTCH3Q9UM47 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NOTCH3Q9UM47 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NOTCH3Q9UM47 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.58■□□□□ 0.4
NOTCH3Q9UM47 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NOTCH3Q9UM47 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.58■□□□□ 0.4
NOTCH3Q9UM47 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.57■□□□□ 0.4
NOTCH3Q9UM47 SERBP1P1-201ENST00000396021 1160 ntBASIC17.57■□□□□ 0.4
NOTCH3Q9UM47 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NOTCH3Q9UM47 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.57■□□□□ 0.4
NOTCH3Q9UM47 AC034268.1-201ENST00000441047 882 ntBASIC17.57■□□□□ 0.4
NOTCH3Q9UM47 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.57■□□□□ 0.4
NOTCH3Q9UM47 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.57■□□□□ 0.4
NOTCH3Q9UM47 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NOTCH3Q9UM47 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOTCH3Q9UM47 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
NOTCH3Q9UM47 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOTCH3Q9UM47 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.56■□□□□ 0.4
NOTCH3Q9UM47 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NOTCH3Q9UM47 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.56■□□□□ 0.4
NOTCH3Q9UM47 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOTCH3Q9UM47 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOTCH3Q9UM47 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOTCH3Q9UM47 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NOTCH3Q9UM47 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.55■□□□□ 0.4
NOTCH3Q9UM47 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NOTCH3Q9UM47 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.55■□□□□ 0.4
NOTCH3Q9UM47 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.55■□□□□ 0.4
NOTCH3Q9UM47 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NOTCH3Q9UM47 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NOTCH3Q9UM47 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NOTCH3Q9UM47 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.55■□□□□ 0.4
NOTCH3Q9UM47 DUX4L19-201ENST00000557448 1267 ntBASIC17.55■□□□□ 0.4
NOTCH3Q9UM47 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.55■□□□□ 0.4
NOTCH3Q9UM47 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NOTCH3Q9UM47 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NOTCH3Q9UM47 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.54■□□□□ 0.4
NOTCH3Q9UM47 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.54■□□□□ 0.4
NOTCH3Q9UM47 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NOTCH3Q9UM47 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
NOTCH3Q9UM47 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NOTCH3Q9UM47 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.54■□□□□ 0.4
NOTCH3Q9UM47 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NOTCH3Q9UM47 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NOTCH3Q9UM47 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.54■□□□□ 0.4
NOTCH3Q9UM47 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.54■□□□□ 0.4
NOTCH3Q9UM47 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NOTCH3Q9UM47 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.53■□□□□ 0.4
NOTCH3Q9UM47 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.53■□□□□ 0.4
NOTCH3Q9UM47 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NOTCH3Q9UM47 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NOTCH3Q9UM47 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NOTCH3Q9UM47 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NOTCH3Q9UM47 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NOTCH3Q9UM47 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms