Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
TFCP2L1Q9NZI6 AL031602.1-201ENST00000633169 911 ntBASIC29.57■■■□□ 2.32
TFCP2L1Q9NZI6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
TFCP2L1Q9NZI6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
TFCP2L1Q9NZI6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
TFCP2L1Q9NZI6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
TFCP2L1Q9NZI6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
TFCP2L1Q9NZI6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
TFCP2L1Q9NZI6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
TFCP2L1Q9NZI6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
TFCP2L1Q9NZI6 YBX1P1-201ENST00000445822 960 ntBASIC29.55■■■□□ 2.32
TFCP2L1Q9NZI6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC29.55■■■□□ 2.32
TFCP2L1Q9NZI6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC29.55■■■□□ 2.32
TFCP2L1Q9NZI6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC29.55■■■□□ 2.32
TFCP2L1Q9NZI6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
TFCP2L1Q9NZI6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC29.54■■■□□ 2.32
TFCP2L1Q9NZI6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC29.54■■■□□ 2.32
TFCP2L1Q9NZI6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
TFCP2L1Q9NZI6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC29.54■■■□□ 2.32
TFCP2L1Q9NZI6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC29.54■■■□□ 2.32
TFCP2L1Q9NZI6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC29.54■■■□□ 2.32
TFCP2L1Q9NZI6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
TFCP2L1Q9NZI6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
TFCP2L1Q9NZI6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
TFCP2L1Q9NZI6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
TFCP2L1Q9NZI6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC29.53■■■□□ 2.32
TFCP2L1Q9NZI6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC29.53■■■□□ 2.32
TFCP2L1Q9NZI6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.53■■■□□ 2.32
TFCP2L1Q9NZI6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TFCP2L1Q9NZI6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TFCP2L1Q9NZI6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TFCP2L1Q9NZI6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TFCP2L1Q9NZI6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
TFCP2L1Q9NZI6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.52■■■□□ 2.32
TFCP2L1Q9NZI6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
TFCP2L1Q9NZI6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
TFCP2L1Q9NZI6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
TFCP2L1Q9NZI6 BX842568.3-201ENST00000418104 571 ntBASIC29.52■■■□□ 2.32
TFCP2L1Q9NZI6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC29.52■■■□□ 2.32
TFCP2L1Q9NZI6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
TFCP2L1Q9NZI6 AC009102.2-201ENST00000606772 1639 ntBASIC29.52■■■□□ 2.32
TFCP2L1Q9NZI6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 DUX4L2-201ENST00000561772 1275 ntBASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 DUX4L6-201ENST00000626483 1275 ntBASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 DUX4L1-201ENST00000627662 1275 ntBASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 DUX4L8-201ENST00000629013 1275 ntBASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 DUX4L3-201ENST00000630187 1275 ntBASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 DUX4L7-201ENST00000630678 1275 ntBASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 DUX4L5-201ENST00000630834 1275 ntBASIC29.51■■■□□ 2.31
TFCP2L1Q9NZI6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
TFCP2L1Q9NZI6 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
TFCP2L1Q9NZI6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC29.5■■■□□ 2.31
TFCP2L1Q9NZI6 AC142086.6-201ENST00000621154 1765 ntBASIC29.49■■■□□ 2.31
TFCP2L1Q9NZI6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
TFCP2L1Q9NZI6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
TFCP2L1Q9NZI6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.49■■■□□ 2.31
TFCP2L1Q9NZI6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
TFCP2L1Q9NZI6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
TFCP2L1Q9NZI6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
TFCP2L1Q9NZI6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
TFCP2L1Q9NZI6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
TFCP2L1Q9NZI6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
TFCP2L1Q9NZI6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
TFCP2L1Q9NZI6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
TFCP2L1Q9NZI6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
TFCP2L1Q9NZI6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC29.47■■■□□ 2.31
TFCP2L1Q9NZI6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC29.47■■■□□ 2.31
TFCP2L1Q9NZI6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 AC241377.3-202ENST00000626088 1088 ntBASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 AC241585.3-202ENST00000628937 1088 ntBASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 AC245100.8-202ENST00000629247 1058 ntBASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TFCP2L1Q9NZI6 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
TFCP2L1Q9NZI6 NME4-202ENST00000382940 766 ntTSL 3 BASIC29.45■■■□□ 2.31
TFCP2L1Q9NZI6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
TFCP2L1Q9NZI6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC29.45■■■□□ 2.31
TFCP2L1Q9NZI6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC29.45■■■□□ 2.31
TFCP2L1Q9NZI6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC29.45■■■□□ 2.31
TFCP2L1Q9NZI6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
TFCP2L1Q9NZI6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
TFCP2L1Q9NZI6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
TFCP2L1Q9NZI6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TFCP2L1Q9NZI6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
TFCP2L1Q9NZI6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.44■■■□□ 2.3
TFCP2L1Q9NZI6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC29.44■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms