Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSL2Q9HCI7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.69■□□□□ 0.74
MSL2Q9HCI7 AC092028.1-203ENST00000608262 953 ntBASIC19.69■□□□□ 0.74
MSL2Q9HCI7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.69■□□□□ 0.74
MSL2Q9HCI7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSL2Q9HCI7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSL2Q9HCI7 AC131274.2-201ENST00000580697 1507 ntBASIC19.67■□□□□ 0.74
MSL2Q9HCI7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSL2Q9HCI7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSL2Q9HCI7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSL2Q9HCI7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.67■□□□□ 0.74
MSL2Q9HCI7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
MSL2Q9HCI7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
MSL2Q9HCI7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.67■□□□□ 0.74
MSL2Q9HCI7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSL2Q9HCI7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MSL2Q9HCI7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MSL2Q9HCI7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
MSL2Q9HCI7 AL022069.1-201ENST00000568025 1636 ntBASIC19.66■□□□□ 0.74
MSL2Q9HCI7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MSL2Q9HCI7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSL2Q9HCI7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.66■□□□□ 0.74
MSL2Q9HCI7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSL2Q9HCI7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.66■□□□□ 0.74
MSL2Q9HCI7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.66■□□□□ 0.74
MSL2Q9HCI7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSL2Q9HCI7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSL2Q9HCI7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MSL2Q9HCI7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSL2Q9HCI7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.65■□□□□ 0.74
MSL2Q9HCI7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
MSL2Q9HCI7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSL2Q9HCI7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSL2Q9HCI7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSL2Q9HCI7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.64■□□□□ 0.73
MSL2Q9HCI7 UNC93B8-201ENST00000511903 705 ntBASIC19.64■□□□□ 0.73
MSL2Q9HCI7 SNX5-217ENST00000606557 1087 ntBASIC19.64■□□□□ 0.73
MSL2Q9HCI7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSL2Q9HCI7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MSL2Q9HCI7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSL2Q9HCI7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MSL2Q9HCI7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MSL2Q9HCI7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.64■□□□□ 0.73
MSL2Q9HCI7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MSL2Q9HCI7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MSL2Q9HCI7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MSL2Q9HCI7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
MSL2Q9HCI7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.63■□□□□ 0.73
MSL2Q9HCI7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
MSL2Q9HCI7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.63■□□□□ 0.73
MSL2Q9HCI7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
MSL2Q9HCI7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MSL2Q9HCI7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MSL2Q9HCI7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
MSL2Q9HCI7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MSL2Q9HCI7 AC004448.1-201ENST00000458332 883 ntBASIC19.62■□□□□ 0.73
MSL2Q9HCI7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MSL2Q9HCI7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.62■□□□□ 0.73
MSL2Q9HCI7 MTDHP2-201ENST00000601468 714 ntBASIC19.62■□□□□ 0.73
MSL2Q9HCI7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.62■□□□□ 0.73
MSL2Q9HCI7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
MSL2Q9HCI7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.62■□□□□ 0.73
MSL2Q9HCI7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
MSL2Q9HCI7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.62■□□□□ 0.73
MSL2Q9HCI7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSL2Q9HCI7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSL2Q9HCI7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSL2Q9HCI7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.61■□□□□ 0.73
MSL2Q9HCI7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
MSL2Q9HCI7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MSL2Q9HCI7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
MSL2Q9HCI7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms