Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.09■■□□□ 1.61
CDT1Q9H211 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDT1Q9H211 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDT1Q9H211 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDT1Q9H211 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
CDT1Q9H211 AC135731.1-201ENST00000569415 2548 ntBASIC25.09■■□□□ 1.61
CDT1Q9H211 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDT1Q9H211 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.08■■□□□ 1.61
CDT1Q9H211 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CDT1Q9H211 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.08■■□□□ 1.61
CDT1Q9H211 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDT1Q9H211 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.08■■□□□ 1.61
CDT1Q9H211 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.08■■□□□ 1.61
CDT1Q9H211 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.08■■□□□ 1.61
CDT1Q9H211 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CDT1Q9H211 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
CDT1Q9H211 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CDT1Q9H211 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
CDT1Q9H211 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.07■■□□□ 1.6
CDT1Q9H211 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDT1Q9H211 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.07■■□□□ 1.6
CDT1Q9H211 MIR3621-201ENST00000580529 85 ntBASIC25.07■■□□□ 1.6
CDT1Q9H211 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CDT1Q9H211 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CDT1Q9H211 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDT1Q9H211 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.06■■□□□ 1.6
CDT1Q9H211 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDT1Q9H211 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CDT1Q9H211 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDT1Q9H211 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.05■■□□□ 1.6
CDT1Q9H211 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDT1Q9H211 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CDT1Q9H211 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.05■■□□□ 1.6
CDT1Q9H211 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CDT1Q9H211 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CDT1Q9H211 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CDT1Q9H211 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.04■■□□□ 1.6
CDT1Q9H211 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.04■■□□□ 1.6
CDT1Q9H211 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CDT1Q9H211 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.04■■□□□ 1.6
CDT1Q9H211 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.03■■□□□ 1.6
CDT1Q9H211 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.03■■□□□ 1.6
CDT1Q9H211 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.03■■□□□ 1.6
CDT1Q9H211 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.03■■□□□ 1.6
CDT1Q9H211 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.03■■□□□ 1.6
CDT1Q9H211 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.03■■□□□ 1.6
CDT1Q9H211 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CDT1Q9H211 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDT1Q9H211 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDT1Q9H211 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
CDT1Q9H211 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.02■■□□□ 1.6
CDT1Q9H211 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.02■■□□□ 1.6
CDT1Q9H211 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.02■■□□□ 1.6
CDT1Q9H211 AL356740.2-201ENST00000601559 647 ntBASIC25.02■■□□□ 1.6
CDT1Q9H211 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.02■■□□□ 1.6
CDT1Q9H211 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDT1Q9H211 AL161729.1-201ENST00000604104 1402 ntBASIC25.02■■□□□ 1.6
CDT1Q9H211 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CDT1Q9H211 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDT1Q9H211 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CDT1Q9H211 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.01■■□□□ 1.59
CDT1Q9H211 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.01■■□□□ 1.59
CDT1Q9H211 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CDT1Q9H211 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CDT1Q9H211 AC131281.2-201ENST00000520478 145 ntBASIC25.01■■□□□ 1.59
CDT1Q9H211 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.01■■□□□ 1.59
CDT1Q9H211 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CDT1Q9H211 EED-207ENST00000528180 1745 ntTSL 5 BASIC25■■□□□ 1.59
CDT1Q9H211 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25■■□□□ 1.59
CDT1Q9H211 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDT1Q9H211 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25■■□□□ 1.59
CDT1Q9H211 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25■■□□□ 1.59
CDT1Q9H211 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CDT1Q9H211 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25■■□□□ 1.59
CDT1Q9H211 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
CDT1Q9H211 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CDT1Q9H211 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CDT1Q9H211 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.99■■□□□ 1.59
CDT1Q9H211 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.99■■□□□ 1.59
CDT1Q9H211 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CDT1Q9H211 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CDT1Q9H211 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDT1Q9H211 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
CDT1Q9H211 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
CDT1Q9H211 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.98■■□□□ 1.59
CDT1Q9H211 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CDT1Q9H211 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.98■■□□□ 1.59
CDT1Q9H211 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.98■■□□□ 1.59
CDT1Q9H211 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.98■■□□□ 1.59
CDT1Q9H211 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.97■■□□□ 1.59
CDT1Q9H211 AC005703.6-201ENST00000623265 1329 ntBASIC24.97■■□□□ 1.59
CDT1Q9H211 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDT1Q9H211 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CDT1Q9H211 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
CDT1Q9H211 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CDT1Q9H211 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.97■■□□□ 1.59
CDT1Q9H211 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.96■■□□□ 1.59
CDT1Q9H211 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CDT1Q9H211 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CDT1Q9H211 AC008406.3-201ENST00000620001 1374 ntBASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms