Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SLC6A18Q96N87 AC131274.2-201ENST00000580697 1507 ntBASIC22.87■■□□□ 1.25
SLC6A18Q96N87 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SLC6A18Q96N87 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 AC024257.2-201ENST00000549699 147 ntBASIC22.86■■□□□ 1.25
SLC6A18Q96N87 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.86■■□□□ 1.25
SLC6A18Q96N87 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SLC6A18Q96N87 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.84■■□□□ 1.25
SLC6A18Q96N87 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC6A18Q96N87 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC6A18Q96N87 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC6A18Q96N87 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SLC6A18Q96N87 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.83■■□□□ 1.25
SLC6A18Q96N87 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.83■■□□□ 1.25
SLC6A18Q96N87 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
SLC6A18Q96N87 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 SUDS3P1-201ENST00000505831 966 ntBASIC22.82■■□□□ 1.24
SLC6A18Q96N87 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SLC6A18Q96N87 AC091060.1-201ENST00000623524 1766 ntBASIC22.81■■□□□ 1.24
SLC6A18Q96N87 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SLC6A18Q96N87 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 DUSP8P4-201ENST00000399538 1761 ntBASIC22.8■■□□□ 1.24
SLC6A18Q96N87 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
SLC6A18Q96N87 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 EDA-201ENST00000338901 1233 ntBASIC22.79■■□□□ 1.24
SLC6A18Q96N87 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
SLC6A18Q96N87 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 MIR6089-201ENST00000616698 64 ntBASIC22.78■■□□□ 1.24
SLC6A18Q96N87 AL355001.2-201ENST00000620617 1191 ntBASIC22.78■■□□□ 1.24
SLC6A18Q96N87 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
SLC6A18Q96N87 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SLC6A18Q96N87 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.77■■□□□ 1.24
SLC6A18Q96N87 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.77■■□□□ 1.24
SLC6A18Q96N87 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.77■■□□□ 1.24
SLC6A18Q96N87 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.77■■□□□ 1.24
SLC6A18Q96N87 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
SLC6A18Q96N87 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
SLC6A18Q96N87 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
SLC6A18Q96N87 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SLC6A18Q96N87 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SLC6A18Q96N87 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms