Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.62■□□□□ 0.89
CPNE4Q96A23 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.62■□□□□ 0.89
CPNE4Q96A23 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CPNE4Q96A23 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.62■□□□□ 0.89
CPNE4Q96A23 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE4Q96A23 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CPNE4Q96A23 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE4Q96A23 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE4Q96A23 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CPNE4Q96A23 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE4Q96A23 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE4Q96A23 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE4Q96A23 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE4Q96A23 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.61■□□□□ 0.89
CPNE4Q96A23 AC010997.5-201ENST00000609182 354 ntBASIC20.61■□□□□ 0.89
CPNE4Q96A23 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE4Q96A23 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.61■□□□□ 0.89
CPNE4Q96A23 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE4Q96A23 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CPNE4Q96A23 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE4Q96A23 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE4Q96A23 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.6■□□□□ 0.89
CPNE4Q96A23 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.6■□□□□ 0.89
CPNE4Q96A23 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE4Q96A23 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE4Q96A23 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.6■□□□□ 0.89
CPNE4Q96A23 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.6■□□□□ 0.89
CPNE4Q96A23 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.6■□□□□ 0.89
CPNE4Q96A23 MIR6722-201ENST00000617286 78 ntBASIC20.6■□□□□ 0.89
CPNE4Q96A23 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.6■□□□□ 0.89
CPNE4Q96A23 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CPNE4Q96A23 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CPNE4Q96A23 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE4Q96A23 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.59■□□□□ 0.89
CPNE4Q96A23 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CPNE4Q96A23 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
CPNE4Q96A23 AL356441.2-201ENST00000443009 864 ntBASIC20.59■□□□□ 0.89
CPNE4Q96A23 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.59■□□□□ 0.89
CPNE4Q96A23 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.58■□□□□ 0.89
CPNE4Q96A23 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE4Q96A23 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE4Q96A23 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.58■□□□□ 0.89
CPNE4Q96A23 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CPNE4Q96A23 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CPNE4Q96A23 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.58■□□□□ 0.89
CPNE4Q96A23 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CPNE4Q96A23 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CPNE4Q96A23 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.57■□□□□ 0.88
CPNE4Q96A23 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.57■□□□□ 0.88
CPNE4Q96A23 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE4Q96A23 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE4Q96A23 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.57■□□□□ 0.88
CPNE4Q96A23 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE4Q96A23 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
CPNE4Q96A23 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CPNE4Q96A23 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPNE4Q96A23 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CPNE4Q96A23 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE4Q96A23 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CPNE4Q96A23 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CPNE4Q96A23 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE4Q96A23 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.56■□□□□ 0.88
CPNE4Q96A23 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.56■□□□□ 0.88
CPNE4Q96A23 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE4Q96A23 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPNE4Q96A23 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CPNE4Q96A23 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE4Q96A23 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE4Q96A23 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE4Q96A23 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CPNE4Q96A23 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE4Q96A23 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CPNE4Q96A23 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE4Q96A23 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.55■□□□□ 0.88
CPNE4Q96A23 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE4Q96A23 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.55■□□□□ 0.88
CPNE4Q96A23 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.55■□□□□ 0.88
CPNE4Q96A23 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE4Q96A23 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPNE4Q96A23 AC141586.4-201ENST00000624558 1573 ntBASIC20.55■□□□□ 0.88
CPNE4Q96A23 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CPNE4Q96A23 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE4Q96A23 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CPNE4Q96A23 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE4Q96A23 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE4Q96A23 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE4Q96A23 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CPNE4Q96A23 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE4Q96A23 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE4Q96A23 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.54■□□□□ 0.88
CPNE4Q96A23 MIR6724-1-201ENST00000616420 92 ntBASIC20.54■□□□□ 0.88
CPNE4Q96A23 MIR6724-2-201ENST00000616483 92 ntBASIC20.54■□□□□ 0.88
CPNE4Q96A23 MIR6724-4-201ENST00000617390 92 ntBASIC20.54■□□□□ 0.88
CPNE4Q96A23 MIR6724-3-201ENST00000622482 92 ntBASIC20.54■□□□□ 0.88
CPNE4Q96A23 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.54■□□□□ 0.88
CPNE4Q96A23 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CPNE4Q96A23 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPNE4Q96A23 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.54■□□□□ 0.88
CPNE4Q96A23 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.54■□□□□ 0.88
CPNE4Q96A23 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms