Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
RFFLQ8WZ73 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
RFFLQ8WZ73 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RFFLQ8WZ73 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.4■■□□□ 1.5
RFFLQ8WZ73 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.4■■□□□ 1.5
RFFLQ8WZ73 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RFFLQ8WZ73 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
RFFLQ8WZ73 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RFFLQ8WZ73 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RFFLQ8WZ73 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.39■■□□□ 1.5
RFFLQ8WZ73 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RFFLQ8WZ73 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.39■■□□□ 1.49
RFFLQ8WZ73 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RFFLQ8WZ73 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RFFLQ8WZ73 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RFFLQ8WZ73 AL161729.1-201ENST00000604104 1402 ntBASIC24.38■■□□□ 1.49
RFFLQ8WZ73 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RFFLQ8WZ73 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
RFFLQ8WZ73 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RFFLQ8WZ73 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.38■■□□□ 1.49
RFFLQ8WZ73 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RFFLQ8WZ73 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RFFLQ8WZ73 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.37■■□□□ 1.49
RFFLQ8WZ73 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RFFLQ8WZ73 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RFFLQ8WZ73 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RFFLQ8WZ73 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RFFLQ8WZ73 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.37■■□□□ 1.49
RFFLQ8WZ73 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.37■■□□□ 1.49
RFFLQ8WZ73 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.36■■□□□ 1.49
RFFLQ8WZ73 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RFFLQ8WZ73 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RFFLQ8WZ73 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RFFLQ8WZ73 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RFFLQ8WZ73 LONRF2P2-201ENST00000439212 571 ntBASIC24.36■■□□□ 1.49
RFFLQ8WZ73 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.36■■□□□ 1.49
RFFLQ8WZ73 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
RFFLQ8WZ73 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RFFLQ8WZ73 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.35■■□□□ 1.49
RFFLQ8WZ73 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RFFLQ8WZ73 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RFFLQ8WZ73 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
RFFLQ8WZ73 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RFFLQ8WZ73 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RFFLQ8WZ73 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RFFLQ8WZ73 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RFFLQ8WZ73 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
RFFLQ8WZ73 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RFFLQ8WZ73 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.35■■□□□ 1.49
RFFLQ8WZ73 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.34■■□□□ 1.49
RFFLQ8WZ73 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.34■■□□□ 1.49
RFFLQ8WZ73 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RFFLQ8WZ73 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RFFLQ8WZ73 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RFFLQ8WZ73 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
RFFLQ8WZ73 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RFFLQ8WZ73 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.34■■□□□ 1.49
RFFLQ8WZ73 AC129492.7-201ENST00000622992 756 ntBASIC24.34■■□□□ 1.49
RFFLQ8WZ73 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RFFLQ8WZ73 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RFFLQ8WZ73 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
RFFLQ8WZ73 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.34■■□□□ 1.49
RFFLQ8WZ73 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
RFFLQ8WZ73 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
RFFLQ8WZ73 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RFFLQ8WZ73 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RFFLQ8WZ73 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RFFLQ8WZ73 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
RFFLQ8WZ73 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
RFFLQ8WZ73 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
RFFLQ8WZ73 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.32■■□□□ 1.48
RFFLQ8WZ73 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFFLQ8WZ73 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFFLQ8WZ73 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RFFLQ8WZ73 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
RFFLQ8WZ73 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
RFFLQ8WZ73 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
RFFLQ8WZ73 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RFFLQ8WZ73 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RFFLQ8WZ73 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RFFLQ8WZ73 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.31■■□□□ 1.48
RFFLQ8WZ73 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.31■■□□□ 1.48
RFFLQ8WZ73 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.31■■□□□ 1.48
RFFLQ8WZ73 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.3■■□□□ 1.48
RFFLQ8WZ73 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.3■■□□□ 1.48
RFFLQ8WZ73 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
RFFLQ8WZ73 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.3■■□□□ 1.48
RFFLQ8WZ73 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RFFLQ8WZ73 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.3■■□□□ 1.48
RFFLQ8WZ73 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RFFLQ8WZ73 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.29■■□□□ 1.48
RFFLQ8WZ73 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.29■■□□□ 1.48
RFFLQ8WZ73 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
RFFLQ8WZ73 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RFFLQ8WZ73 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RFFLQ8WZ73 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RFFLQ8WZ73 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
RFFLQ8WZ73 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.29■■□□□ 1.48
RFFLQ8WZ73 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.29■■□□□ 1.48
RFFLQ8WZ73 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 354.7 ms