Protein–RNA interactions for Protein: Q8NEP9

ZNF555, Zinc finger protein 555, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF555Q8NEP9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF555Q8NEP9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.26■□□□□ 0.99
ZNF555Q8NEP9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF555Q8NEP9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF555Q8NEP9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF555Q8NEP9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF555Q8NEP9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF555Q8NEP9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF555Q8NEP9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF555Q8NEP9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ZNF555Q8NEP9 HLA-V-202ENST00000446817 847 ntBASIC21.25■□□□□ 0.99
ZNF555Q8NEP9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ZNF555Q8NEP9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
ZNF555Q8NEP9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF555Q8NEP9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF555Q8NEP9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ZNF555Q8NEP9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 LINC00526-201ENST00000581067 1875 ntBASIC21.24■□□□□ 0.99
ZNF555Q8NEP9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.23■□□□□ 0.99
ZNF555Q8NEP9 AL162393.1-201ENST00000437852 946 ntBASIC21.23■□□□□ 0.99
ZNF555Q8NEP9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF555Q8NEP9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
ZNF555Q8NEP9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
ZNF555Q8NEP9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF555Q8NEP9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF555Q8NEP9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF555Q8NEP9 ANOS2P-203ENST00000472227 1816 ntBASIC21.22■□□□□ 0.99
ZNF555Q8NEP9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF555Q8NEP9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF555Q8NEP9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ZNF555Q8NEP9 AC127496.7-201ENST00000625110 1798 ntBASIC21.22■□□□□ 0.99
ZNF555Q8NEP9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ZNF555Q8NEP9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
ZNF555Q8NEP9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF555Q8NEP9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF555Q8NEP9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF555Q8NEP9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF555Q8NEP9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF555Q8NEP9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF555Q8NEP9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF555Q8NEP9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF555Q8NEP9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF555Q8NEP9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF555Q8NEP9 C1orf229-201ENST00000623686 2258 ntBASIC21.21■□□□□ 0.99
ZNF555Q8NEP9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF555Q8NEP9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF555Q8NEP9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF555Q8NEP9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF555Q8NEP9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF555Q8NEP9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF555Q8NEP9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF555Q8NEP9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF555Q8NEP9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.2■□□□□ 0.98
ZNF555Q8NEP9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF555Q8NEP9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF555Q8NEP9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.2■□□□□ 0.98
ZNF555Q8NEP9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF555Q8NEP9 GUSBP5-202ENST00000510805 1989 ntBASIC21.19■□□□□ 0.98
ZNF555Q8NEP9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF555Q8NEP9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF555Q8NEP9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF555Q8NEP9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF555Q8NEP9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF555Q8NEP9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF555Q8NEP9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ZNF555Q8NEP9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF555Q8NEP9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF555Q8NEP9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF555Q8NEP9 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
ZNF555Q8NEP9 DUSP8P3-201ENST00000399571 1760 ntBASIC21.18■□□□□ 0.98
ZNF555Q8NEP9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF555Q8NEP9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF555Q8NEP9 AC137767.1-201ENST00000602918 1920 ntBASIC21.18■□□□□ 0.98
ZNF555Q8NEP9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ZNF555Q8NEP9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF555Q8NEP9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF555Q8NEP9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ZNF555Q8NEP9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF555Q8NEP9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ZNF555Q8NEP9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF555Q8NEP9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF555Q8NEP9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF555Q8NEP9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF555Q8NEP9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF555Q8NEP9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms