Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LINC01561Q8N1V8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 ANOS2P-203ENST00000472227 1816 ntBASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 DUSP8P3-201ENST00000399571 1760 ntBASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC15.39■□□□□ 0.05
LINC01561Q8N1V8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01561Q8N1V8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.38■□□□□ 0.05
LINC01561Q8N1V8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.38■□□□□ 0.05
LINC01561Q8N1V8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.38■□□□□ 0.05
LINC01561Q8N1V8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
LINC01561Q8N1V8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC15.38■□□□□ 0.05
LINC01561Q8N1V8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.38■□□□□ 0.05
LINC01561Q8N1V8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01561Q8N1V8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01561Q8N1V8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
LINC01561Q8N1V8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01561Q8N1V8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01561Q8N1V8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC01561Q8N1V8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 RPS2P7-201ENST00000447334 885 ntBASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC15.37■□□□□ 0.05
LINC01561Q8N1V8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 MIR7108-201ENST00000614319 87 ntBASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC01561Q8N1V8 AL117328.2-201ENST00000624617 1940 ntBASIC15.35■□□□□ 0.05
LINC01561Q8N1V8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LINC01561Q8N1V8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01561Q8N1V8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01561Q8N1V8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01561Q8N1V8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC01561Q8N1V8 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01561Q8N1V8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01561Q8N1V8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC15.35■□□□□ 0.05
LINC01561Q8N1V8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC01561Q8N1V8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LINC01561Q8N1V8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 AC018755.3-202ENST00000596210 929 ntBASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 AL022069.1-201ENST00000568025 1636 ntBASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC01561Q8N1V8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LINC01561Q8N1V8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms