Protein–RNA interactions for Protein: Q8N1F7

NUP93, Nuclear pore complex protein Nup93, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93Q8N1F7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NUP93Q8N1F7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.24■■□□□ 1.47
NUP93Q8N1F7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NUP93Q8N1F7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NUP93Q8N1F7 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.24■■□□□ 1.47
NUP93Q8N1F7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.24■■□□□ 1.47
NUP93Q8N1F7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.24■■□□□ 1.47
NUP93Q8N1F7 AC008406.3-201ENST00000620001 1374 ntBASIC24.24■■□□□ 1.47
NUP93Q8N1F7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.24■■□□□ 1.47
NUP93Q8N1F7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
NUP93Q8N1F7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.24■■□□□ 1.47
NUP93Q8N1F7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
NUP93Q8N1F7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.24■■□□□ 1.47
NUP93Q8N1F7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUP93Q8N1F7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUP93Q8N1F7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUP93Q8N1F7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.23■■□□□ 1.47
NUP93Q8N1F7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUP93Q8N1F7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
NUP93Q8N1F7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUP93Q8N1F7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUP93Q8N1F7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUP93Q8N1F7 AC020928.2-201ENST00000588717 2197 ntBASIC24.23■■□□□ 1.47
NUP93Q8N1F7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
NUP93Q8N1F7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
NUP93Q8N1F7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NUP93Q8N1F7 AC142381.3-201ENST00000568208 1670 ntBASIC24.22■■□□□ 1.47
NUP93Q8N1F7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
NUP93Q8N1F7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.22■■□□□ 1.47
NUP93Q8N1F7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NUP93Q8N1F7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.22■■□□□ 1.47
NUP93Q8N1F7 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.22■■□□□ 1.47
NUP93Q8N1F7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.22■■□□□ 1.47
NUP93Q8N1F7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
NUP93Q8N1F7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.22■■□□□ 1.47
NUP93Q8N1F7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
NUP93Q8N1F7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
NUP93Q8N1F7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
NUP93Q8N1F7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.21■■□□□ 1.47
NUP93Q8N1F7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
NUP93Q8N1F7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.21■■□□□ 1.47
NUP93Q8N1F7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
NUP93Q8N1F7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
NUP93Q8N1F7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.2■■□□□ 1.46
NUP93Q8N1F7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
NUP93Q8N1F7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
NUP93Q8N1F7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.2■■□□□ 1.46
NUP93Q8N1F7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.19■■□□□ 1.46
NUP93Q8N1F7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
NUP93Q8N1F7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
NUP93Q8N1F7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
NUP93Q8N1F7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
NUP93Q8N1F7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NUP93Q8N1F7 AC138932.3-201ENST00000567634 1902 ntBASIC24.18■■□□□ 1.46
NUP93Q8N1F7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
NUP93Q8N1F7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.18■■□□□ 1.46
NUP93Q8N1F7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC24.18■■□□□ 1.46
NUP93Q8N1F7 AC131281.2-201ENST00000520478 145 ntBASIC24.18■■□□□ 1.46
NUP93Q8N1F7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NUP93Q8N1F7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
NUP93Q8N1F7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
NUP93Q8N1F7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
NUP93Q8N1F7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NUP93Q8N1F7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
NUP93Q8N1F7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.17■■□□□ 1.46
NUP93Q8N1F7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.17■■□□□ 1.46
NUP93Q8N1F7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
NUP93Q8N1F7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.17■■□□□ 1.46
NUP93Q8N1F7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
NUP93Q8N1F7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.17■■□□□ 1.46
NUP93Q8N1F7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
NUP93Q8N1F7 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NUP93Q8N1F7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
NUP93Q8N1F7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
NUP93Q8N1F7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NUP93Q8N1F7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NUP93Q8N1F7 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.16■■□□□ 1.46
NUP93Q8N1F7 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.16■■□□□ 1.46
NUP93Q8N1F7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
NUP93Q8N1F7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.15■■□□□ 1.46
NUP93Q8N1F7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.15■■□□□ 1.46
NUP93Q8N1F7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
NUP93Q8N1F7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NUP93Q8N1F7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NUP93Q8N1F7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
NUP93Q8N1F7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NUP93Q8N1F7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
NUP93Q8N1F7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
NUP93Q8N1F7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.15■■□□□ 1.46
NUP93Q8N1F7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.15■■□□□ 1.46
NUP93Q8N1F7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
NUP93Q8N1F7 AL161729.1-201ENST00000604104 1402 ntBASIC24.15■■□□□ 1.46
NUP93Q8N1F7 AC005703.6-201ENST00000623265 1329 ntBASIC24.14■■□□□ 1.46
NUP93Q8N1F7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.14■■□□□ 1.46
NUP93Q8N1F7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NUP93Q8N1F7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NUP93Q8N1F7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
NUP93Q8N1F7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
NUP93Q8N1F7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
NUP93Q8N1F7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms