Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 CLDN5-201ENST00000403084 2357 ntBASIC25.65■■□□□ 1.7
DHX40Q8IX18 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DHX40Q8IX18 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
DHX40Q8IX18 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
DHX40Q8IX18 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
DHX40Q8IX18 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC25.64■■□□□ 1.7
DHX40Q8IX18 RNF126P1-201ENST00000567452 1320 ntBASIC25.64■■□□□ 1.7
DHX40Q8IX18 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
DHX40Q8IX18 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.64■■□□□ 1.7
DHX40Q8IX18 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
DHX40Q8IX18 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.64■■□□□ 1.69
DHX40Q8IX18 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
DHX40Q8IX18 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.63■■□□□ 1.69
DHX40Q8IX18 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.63■■□□□ 1.69
DHX40Q8IX18 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.63■■□□□ 1.69
DHX40Q8IX18 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DHX40Q8IX18 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
DHX40Q8IX18 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
DHX40Q8IX18 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.62■■□□□ 1.69
DHX40Q8IX18 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
DHX40Q8IX18 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
DHX40Q8IX18 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
DHX40Q8IX18 KRT18P10-201ENST00000388836 1287 ntBASIC25.62■■□□□ 1.69
DHX40Q8IX18 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
DHX40Q8IX18 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
DHX40Q8IX18 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DHX40Q8IX18 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
DHX40Q8IX18 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
DHX40Q8IX18 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
DHX40Q8IX18 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.6■■□□□ 1.69
DHX40Q8IX18 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
DHX40Q8IX18 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
DHX40Q8IX18 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DHX40Q8IX18 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
DHX40Q8IX18 AC233723.2-201ENST00000623798 2106 ntBASIC25.6■■□□□ 1.69
DHX40Q8IX18 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DHX40Q8IX18 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
DHX40Q8IX18 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
DHX40Q8IX18 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
DHX40Q8IX18 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DHX40Q8IX18 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.59■■□□□ 1.69
DHX40Q8IX18 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
DHX40Q8IX18 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
DHX40Q8IX18 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
DHX40Q8IX18 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
DHX40Q8IX18 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.59■■□□□ 1.69
DHX40Q8IX18 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
DHX40Q8IX18 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
DHX40Q8IX18 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
DHX40Q8IX18 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
DHX40Q8IX18 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
DHX40Q8IX18 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
DHX40Q8IX18 DUSP8P3-201ENST00000399571 1760 ntBASIC25.58■■□□□ 1.69
DHX40Q8IX18 EP400NL-214ENST00000641289 2402 ntBASIC25.58■■□□□ 1.69
DHX40Q8IX18 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.68
DHX40Q8IX18 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.58■■□□□ 1.68
DHX40Q8IX18 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
DHX40Q8IX18 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
DHX40Q8IX18 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.57■■□□□ 1.68
DHX40Q8IX18 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
DHX40Q8IX18 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.57■■□□□ 1.68
DHX40Q8IX18 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
DHX40Q8IX18 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.57■■□□□ 1.68
DHX40Q8IX18 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.57■■□□□ 1.68
DHX40Q8IX18 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
DHX40Q8IX18 AC092068.2-201ENST00000590491 1708 ntBASIC25.57■■□□□ 1.68
DHX40Q8IX18 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
DHX40Q8IX18 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
DHX40Q8IX18 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
DHX40Q8IX18 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
DHX40Q8IX18 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
DHX40Q8IX18 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.55■■□□□ 1.68
DHX40Q8IX18 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
DHX40Q8IX18 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
DHX40Q8IX18 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
DHX40Q8IX18 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
DHX40Q8IX18 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.55■■□□□ 1.68
DHX40Q8IX18 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
DHX40Q8IX18 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
DHX40Q8IX18 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.54■■□□□ 1.68
DHX40Q8IX18 ABHD17AP5-201ENST00000580133 923 ntBASIC25.54■■□□□ 1.68
DHX40Q8IX18 C1orf229-201ENST00000623686 2258 ntBASIC25.54■■□□□ 1.68
DHX40Q8IX18 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.53■■□□□ 1.68
DHX40Q8IX18 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DHX40Q8IX18 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
DHX40Q8IX18 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DHX40Q8IX18 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.53■■□□□ 1.68
DHX40Q8IX18 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
DHX40Q8IX18 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.53■■□□□ 1.68
DHX40Q8IX18 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
DHX40Q8IX18 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.53■■□□□ 1.68
DHX40Q8IX18 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC25.52■■□□□ 1.68
DHX40Q8IX18 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DHX40Q8IX18 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
DHX40Q8IX18 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
DHX40Q8IX18 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
DHX40Q8IX18 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DHX40Q8IX18 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DHX40Q8IX18 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DHX40Q8IX18 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms