Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC145676.1-201ENST00000514988 2004 ntBASIC24.34■■□□□ 1.49
RNF135Q8IUD6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.34■■□□□ 1.49
RNF135Q8IUD6 CA15P2-201ENST00000611168 834 ntBASIC24.34■■□□□ 1.49
RNF135Q8IUD6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF135Q8IUD6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.34■■□□□ 1.49
RNF135Q8IUD6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF135Q8IUD6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF135Q8IUD6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF135Q8IUD6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF135Q8IUD6 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RNF135Q8IUD6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
RNF135Q8IUD6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF135Q8IUD6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.33■■□□□ 1.49
RNF135Q8IUD6 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.33■■□□□ 1.49
RNF135Q8IUD6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.33■■□□□ 1.49
RNF135Q8IUD6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.33■■□□□ 1.49
RNF135Q8IUD6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF135Q8IUD6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.32■■□□□ 1.48
RNF135Q8IUD6 SF1-220ENST00000626028 704 ntTSL 2 BASIC24.32■■□□□ 1.48
RNF135Q8IUD6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RNF135Q8IUD6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF135Q8IUD6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.32■■□□□ 1.48
RNF135Q8IUD6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF135Q8IUD6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF135Q8IUD6 AC010501.1-201ENST00000606270 1962 ntBASIC24.31■■□□□ 1.48
RNF135Q8IUD6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC24.31■■□□□ 1.48
RNF135Q8IUD6 RASA4CP-201ENST00000424092 1398 ntBASIC24.3■■□□□ 1.48
RNF135Q8IUD6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF135Q8IUD6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF135Q8IUD6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RNF135Q8IUD6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF135Q8IUD6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF135Q8IUD6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RNF135Q8IUD6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.3■■□□□ 1.48
RNF135Q8IUD6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.3■■□□□ 1.48
RNF135Q8IUD6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF135Q8IUD6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF135Q8IUD6 MIR4767-201ENST00000582827 78 ntBASIC24.29■■□□□ 1.48
RNF135Q8IUD6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RNF135Q8IUD6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF135Q8IUD6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF135Q8IUD6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.29■■□□□ 1.48
RNF135Q8IUD6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
RNF135Q8IUD6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.29■■□□□ 1.48
RNF135Q8IUD6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF135Q8IUD6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF135Q8IUD6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RNF135Q8IUD6 IRS3P-201ENST00000223076 1006 ntBASIC24.28■■□□□ 1.48
RNF135Q8IUD6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.28■■□□□ 1.48
RNF135Q8IUD6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.28■■□□□ 1.48
RNF135Q8IUD6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RNF135Q8IUD6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
RNF135Q8IUD6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.27■■□□□ 1.48
RNF135Q8IUD6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
RNF135Q8IUD6 IKBKGP1-201ENST00000612193 1073 ntBASIC24.27■■□□□ 1.48
RNF135Q8IUD6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RNF135Q8IUD6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNF135Q8IUD6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.27■■□□□ 1.48
RNF135Q8IUD6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
RNF135Q8IUD6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF135Q8IUD6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.26■■□□□ 1.47
RNF135Q8IUD6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.26■■□□□ 1.47
RNF135Q8IUD6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF135Q8IUD6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.25■■□□□ 1.47
RNF135Q8IUD6 SYT6-210ENST00000641643 1587 ntBASIC24.25■■□□□ 1.47
RNF135Q8IUD6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF135Q8IUD6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF135Q8IUD6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
RNF135Q8IUD6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
RNF135Q8IUD6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF135Q8IUD6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
RNF135Q8IUD6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF135Q8IUD6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF135Q8IUD6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.23■■□□□ 1.47
RNF135Q8IUD6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.23■■□□□ 1.47
RNF135Q8IUD6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RNF135Q8IUD6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
RNF135Q8IUD6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.23■■□□□ 1.47
RNF135Q8IUD6 DUSP8P4-201ENST00000399538 1761 ntBASIC24.23■■□□□ 1.47
RNF135Q8IUD6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RNF135Q8IUD6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RNF135Q8IUD6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RNF135Q8IUD6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.22■■□□□ 1.47
RNF135Q8IUD6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.22■■□□□ 1.47
RNF135Q8IUD6 AC027682.1-201ENST00000562846 899 ntBASIC24.22■■□□□ 1.47
RNF135Q8IUD6 AC022517.1-201ENST00000592429 346 ntBASIC24.22■■□□□ 1.47
RNF135Q8IUD6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms