Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
COPS6Q7L5N1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
COPS6Q7L5N1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
COPS6Q7L5N1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
COPS6Q7L5N1 AL022069.1-201ENST00000568025 1636 ntBASIC29.27■■■□□ 2.28
COPS6Q7L5N1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC29.27■■■□□ 2.28
COPS6Q7L5N1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
COPS6Q7L5N1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.27■■■□□ 2.28
COPS6Q7L5N1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.27■■■□□ 2.28
COPS6Q7L5N1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
COPS6Q7L5N1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
COPS6Q7L5N1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
COPS6Q7L5N1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
COPS6Q7L5N1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.27■■■□□ 2.28
COPS6Q7L5N1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
COPS6Q7L5N1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
COPS6Q7L5N1 HLA-L-211ENST00000482052 1765 ntBASIC29.26■■■□□ 2.28
COPS6Q7L5N1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
COPS6Q7L5N1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
COPS6Q7L5N1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC29.26■■■□□ 2.27
COPS6Q7L5N1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.26■■■□□ 2.27
COPS6Q7L5N1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC29.26■■■□□ 2.27
COPS6Q7L5N1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
COPS6Q7L5N1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
COPS6Q7L5N1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
COPS6Q7L5N1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
COPS6Q7L5N1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
COPS6Q7L5N1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
COPS6Q7L5N1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC29.24■■■□□ 2.27
COPS6Q7L5N1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC29.24■■■□□ 2.27
COPS6Q7L5N1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
COPS6Q7L5N1 AC005837.3-201ENST00000612163 286 ntBASIC29.24■■■□□ 2.27
COPS6Q7L5N1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC29.24■■■□□ 2.27
COPS6Q7L5N1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
COPS6Q7L5N1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
COPS6Q7L5N1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
COPS6Q7L5N1 AC022211.4-201ENST00000625094 2161 ntBASIC29.23■■■□□ 2.27
COPS6Q7L5N1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
COPS6Q7L5N1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
COPS6Q7L5N1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
COPS6Q7L5N1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
COPS6Q7L5N1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
COPS6Q7L5N1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
COPS6Q7L5N1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
COPS6Q7L5N1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.22■■■□□ 2.27
COPS6Q7L5N1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
COPS6Q7L5N1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
COPS6Q7L5N1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC29.21■■■□□ 2.27
COPS6Q7L5N1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
COPS6Q7L5N1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC29.21■■■□□ 2.27
COPS6Q7L5N1 SRD5A1P1-201ENST00000442297 786 ntBASIC29.21■■■□□ 2.27
COPS6Q7L5N1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC29.21■■■□□ 2.27
COPS6Q7L5N1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
COPS6Q7L5N1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
COPS6Q7L5N1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC29.2■■■□□ 2.27
COPS6Q7L5N1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.27
COPS6Q7L5N1 UNC93B3-201ENST00000308076 687 ntBASIC29.2■■■□□ 2.26
COPS6Q7L5N1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
COPS6Q7L5N1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC29.2■■■□□ 2.26
COPS6Q7L5N1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
COPS6Q7L5N1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
COPS6Q7L5N1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.2■■■□□ 2.26
COPS6Q7L5N1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC29.2■■■□□ 2.26
COPS6Q7L5N1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
COPS6Q7L5N1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.2■■■□□ 2.26
COPS6Q7L5N1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC29.2■■■□□ 2.26
COPS6Q7L5N1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
COPS6Q7L5N1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
COPS6Q7L5N1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
COPS6Q7L5N1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.19■■■□□ 2.26
COPS6Q7L5N1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC29.19■■■□□ 2.26
COPS6Q7L5N1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC29.19■■■□□ 2.26
COPS6Q7L5N1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
COPS6Q7L5N1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
COPS6Q7L5N1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC29.18■■■□□ 2.26
COPS6Q7L5N1 PBX2P1-201ENST00000493219 1291 ntBASIC29.18■■■□□ 2.26
COPS6Q7L5N1 AC133561.4-201ENST00000566112 224 ntBASIC29.18■■■□□ 2.26
COPS6Q7L5N1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
COPS6Q7L5N1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC29.18■■■□□ 2.26
COPS6Q7L5N1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
COPS6Q7L5N1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.18■■■□□ 2.26
COPS6Q7L5N1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
COPS6Q7L5N1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
COPS6Q7L5N1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
COPS6Q7L5N1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
COPS6Q7L5N1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
COPS6Q7L5N1 AC106739.1-201ENST00000617035 715 ntBASIC29.17■■■□□ 2.26
COPS6Q7L5N1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
COPS6Q7L5N1 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC29.17■■■□□ 2.26
COPS6Q7L5N1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC29.17■■■□□ 2.26
COPS6Q7L5N1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
COPS6Q7L5N1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
COPS6Q7L5N1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
COPS6Q7L5N1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC29.16■■■□□ 2.26
COPS6Q7L5N1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
COPS6Q7L5N1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.16■■■□□ 2.26
COPS6Q7L5N1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
COPS6Q7L5N1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
COPS6Q7L5N1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
COPS6Q7L5N1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms