Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.09■■□□□ 1.61
CNKSR3Q6P9H4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
CNKSR3Q6P9H4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CNKSR3Q6P9H4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CNKSR3Q6P9H4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CNKSR3Q6P9H4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CNKSR3Q6P9H4 AC009102.2-201ENST00000606772 1639 ntBASIC25.08■■□□□ 1.6
CNKSR3Q6P9H4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CNKSR3Q6P9H4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CNKSR3Q6P9H4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CNKSR3Q6P9H4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CNKSR3Q6P9H4 AC099791.1-201ENST00000416440 715 ntBASIC25.07■■□□□ 1.6
CNKSR3Q6P9H4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.07■■□□□ 1.6
CNKSR3Q6P9H4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.07■■□□□ 1.6
CNKSR3Q6P9H4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.07■■□□□ 1.6
CNKSR3Q6P9H4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CNKSR3Q6P9H4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CNKSR3Q6P9H4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.06■■□□□ 1.6
CNKSR3Q6P9H4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.06■■□□□ 1.6
CNKSR3Q6P9H4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.06■■□□□ 1.6
CNKSR3Q6P9H4 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CNKSR3Q6P9H4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CNKSR3Q6P9H4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CNKSR3Q6P9H4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CNKSR3Q6P9H4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.05■■□□□ 1.6
CNKSR3Q6P9H4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.05■■□□□ 1.6
CNKSR3Q6P9H4 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CNKSR3Q6P9H4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CNKSR3Q6P9H4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.04■■□□□ 1.6
CNKSR3Q6P9H4 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.04■■□□□ 1.6
CNKSR3Q6P9H4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CNKSR3Q6P9H4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CNKSR3Q6P9H4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.03■■□□□ 1.6
CNKSR3Q6P9H4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CNKSR3Q6P9H4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.03■■□□□ 1.6
CNKSR3Q6P9H4 AC136469.2-201ENST00000623944 1028 ntBASIC25.03■■□□□ 1.6
CNKSR3Q6P9H4 AC241377.3-202ENST00000626088 1088 ntBASIC25.03■■□□□ 1.6
CNKSR3Q6P9H4 AC241585.3-202ENST00000628937 1088 ntBASIC25.03■■□□□ 1.6
CNKSR3Q6P9H4 AC245100.8-202ENST00000629247 1058 ntBASIC25.03■■□□□ 1.6
CNKSR3Q6P9H4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CNKSR3Q6P9H4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CNKSR3Q6P9H4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CNKSR3Q6P9H4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CNKSR3Q6P9H4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CNKSR3Q6P9H4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CNKSR3Q6P9H4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.02■■□□□ 1.6
CNKSR3Q6P9H4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CNKSR3Q6P9H4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.02■■□□□ 1.6
CNKSR3Q6P9H4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CNKSR3Q6P9H4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CNKSR3Q6P9H4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CNKSR3Q6P9H4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CNKSR3Q6P9H4 C17orf82-201ENST00000623772 1530 ntBASIC25.02■■□□□ 1.6
CNKSR3Q6P9H4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CNKSR3Q6P9H4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.01■■□□□ 1.59
CNKSR3Q6P9H4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.01■■□□□ 1.59
CNKSR3Q6P9H4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.01■■□□□ 1.59
CNKSR3Q6P9H4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.01■■□□□ 1.59
CNKSR3Q6P9H4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CNKSR3Q6P9H4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CNKSR3Q6P9H4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CNKSR3Q6P9H4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CNKSR3Q6P9H4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
CNKSR3Q6P9H4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CNKSR3Q6P9H4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC25■■□□□ 1.59
CNKSR3Q6P9H4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25■■□□□ 1.59
CNKSR3Q6P9H4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CNKSR3Q6P9H4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CNKSR3Q6P9H4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CNKSR3Q6P9H4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25■■□□□ 1.59
CNKSR3Q6P9H4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CNKSR3Q6P9H4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CNKSR3Q6P9H4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CNKSR3Q6P9H4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CNKSR3Q6P9H4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CNKSR3Q6P9H4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.99■■□□□ 1.59
CNKSR3Q6P9H4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.99■■□□□ 1.59
CNKSR3Q6P9H4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.98■■□□□ 1.59
CNKSR3Q6P9H4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CNKSR3Q6P9H4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CNKSR3Q6P9H4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.98■■□□□ 1.59
CNKSR3Q6P9H4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.98■■□□□ 1.59
CNKSR3Q6P9H4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CNKSR3Q6P9H4 AL022069.1-201ENST00000568025 1636 ntBASIC24.97■■□□□ 1.59
CNKSR3Q6P9H4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CNKSR3Q6P9H4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.97■■□□□ 1.59
CNKSR3Q6P9H4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
CNKSR3Q6P9H4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.97■■□□□ 1.59
CNKSR3Q6P9H4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
CNKSR3Q6P9H4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.97■■□□□ 1.59
CNKSR3Q6P9H4 AC233992.3-201ENST00000607491 485 ntBASIC24.97■■□□□ 1.59
CNKSR3Q6P9H4 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.97■■□□□ 1.59
CNKSR3Q6P9H4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.97■■□□□ 1.59
CNKSR3Q6P9H4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.97■■□□□ 1.59
CNKSR3Q6P9H4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.97■■□□□ 1.59
CNKSR3Q6P9H4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
CNKSR3Q6P9H4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CNKSR3Q6P9H4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CNKSR3Q6P9H4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CNKSR3Q6P9H4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms