Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.5■■□□□ 1.51
VARS2Q5ST30 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.5■■□□□ 1.51
VARS2Q5ST30 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.5■■□□□ 1.51
VARS2Q5ST30 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.5■■□□□ 1.51
VARS2Q5ST30 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.5■■□□□ 1.51
VARS2Q5ST30 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
VARS2Q5ST30 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VARS2Q5ST30 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
VARS2Q5ST30 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.49■■□□□ 1.51
VARS2Q5ST30 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
VARS2Q5ST30 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
VARS2Q5ST30 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
VARS2Q5ST30 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VARS2Q5ST30 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.48■■□□□ 1.51
VARS2Q5ST30 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
VARS2Q5ST30 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
VARS2Q5ST30 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.47■■□□□ 1.51
VARS2Q5ST30 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VARS2Q5ST30 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
VARS2Q5ST30 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
VARS2Q5ST30 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
VARS2Q5ST30 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VARS2Q5ST30 SRD5A1P1-201ENST00000442297 786 ntBASIC24.47■■□□□ 1.51
VARS2Q5ST30 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
VARS2Q5ST30 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC24.47■■□□□ 1.51
VARS2Q5ST30 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
VARS2Q5ST30 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VARS2Q5ST30 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
VARS2Q5ST30 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
VARS2Q5ST30 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
VARS2Q5ST30 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
VARS2Q5ST30 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.46■■□□□ 1.51
VARS2Q5ST30 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
VARS2Q5ST30 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
VARS2Q5ST30 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
VARS2Q5ST30 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
VARS2Q5ST30 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
VARS2Q5ST30 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
VARS2Q5ST30 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
VARS2Q5ST30 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
VARS2Q5ST30 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
VARS2Q5ST30 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
VARS2Q5ST30 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
VARS2Q5ST30 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
VARS2Q5ST30 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.45■■□□□ 1.5
VARS2Q5ST30 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
VARS2Q5ST30 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
VARS2Q5ST30 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.45■■□□□ 1.5
VARS2Q5ST30 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
VARS2Q5ST30 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VARS2Q5ST30 HLA-L-211ENST00000482052 1765 ntBASIC24.44■■□□□ 1.5
VARS2Q5ST30 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.44■■□□□ 1.5
VARS2Q5ST30 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VARS2Q5ST30 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VARS2Q5ST30 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.44■■□□□ 1.5
VARS2Q5ST30 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
VARS2Q5ST30 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.44■■□□□ 1.5
VARS2Q5ST30 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
VARS2Q5ST30 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
VARS2Q5ST30 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.44■■□□□ 1.5
VARS2Q5ST30 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
VARS2Q5ST30 AC005837.3-201ENST00000612163 286 ntBASIC24.43■■□□□ 1.5
VARS2Q5ST30 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
VARS2Q5ST30 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.42■■□□□ 1.5
VARS2Q5ST30 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
VARS2Q5ST30 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
VARS2Q5ST30 AC133561.4-201ENST00000566112 224 ntBASIC24.42■■□□□ 1.5
VARS2Q5ST30 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
VARS2Q5ST30 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.41■■□□□ 1.5
VARS2Q5ST30 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.41■■□□□ 1.5
VARS2Q5ST30 UNC93B3-201ENST00000308076 687 ntBASIC24.41■■□□□ 1.5
VARS2Q5ST30 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
VARS2Q5ST30 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.41■■□□□ 1.5
VARS2Q5ST30 PBX2P1-201ENST00000493219 1291 ntBASIC24.41■■□□□ 1.5
VARS2Q5ST30 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
VARS2Q5ST30 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
VARS2Q5ST30 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
VARS2Q5ST30 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.41■■□□□ 1.5
VARS2Q5ST30 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
VARS2Q5ST30 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
VARS2Q5ST30 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
VARS2Q5ST30 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.4■■□□□ 1.5
VARS2Q5ST30 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
VARS2Q5ST30 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
VARS2Q5ST30 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
VARS2Q5ST30 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.4■■□□□ 1.5
VARS2Q5ST30 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
VARS2Q5ST30 AC106739.1-201ENST00000617035 715 ntBASIC24.4■■□□□ 1.5
VARS2Q5ST30 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
VARS2Q5ST30 AC022211.4-201ENST00000625094 2161 ntBASIC24.4■■□□□ 1.5
VARS2Q5ST30 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
VARS2Q5ST30 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.39■■□□□ 1.5
VARS2Q5ST30 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.39■■□□□ 1.5
VARS2Q5ST30 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
VARS2Q5ST30 AC092666.2-201ENST00000613287 246 ntBASIC24.39■■□□□ 1.49
VARS2Q5ST30 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
VARS2Q5ST30 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.39■■□□□ 1.49
VARS2Q5ST30 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.38■■□□□ 1.49
VARS2Q5ST30 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
VARS2Q5ST30 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms