Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
FNDC3BQ53EP0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
FNDC3BQ53EP0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
FNDC3BQ53EP0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.36■■□□□ 1.33
FNDC3BQ53EP0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
FNDC3BQ53EP0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FNDC3BQ53EP0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
FNDC3BQ53EP0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
FNDC3BQ53EP0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
FNDC3BQ53EP0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.35■■□□□ 1.33
FNDC3BQ53EP0 SRD5A1P1-201ENST00000442297 786 ntBASIC23.35■■□□□ 1.33
FNDC3BQ53EP0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.35■■□□□ 1.33
FNDC3BQ53EP0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.35■■□□□ 1.33
FNDC3BQ53EP0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.35■■□□□ 1.33
FNDC3BQ53EP0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
FNDC3BQ53EP0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
FNDC3BQ53EP0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
FNDC3BQ53EP0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
FNDC3BQ53EP0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.34■■□□□ 1.33
FNDC3BQ53EP0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
FNDC3BQ53EP0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
FNDC3BQ53EP0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
FNDC3BQ53EP0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.33■■□□□ 1.33
FNDC3BQ53EP0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
FNDC3BQ53EP0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
FNDC3BQ53EP0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FNDC3BQ53EP0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FNDC3BQ53EP0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FNDC3BQ53EP0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FNDC3BQ53EP0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.32■■□□□ 1.32
FNDC3BQ53EP0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.32■■□□□ 1.32
FNDC3BQ53EP0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
FNDC3BQ53EP0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.32■■□□□ 1.32
FNDC3BQ53EP0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
FNDC3BQ53EP0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.31■■□□□ 1.32
FNDC3BQ53EP0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
FNDC3BQ53EP0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.31■■□□□ 1.32
FNDC3BQ53EP0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
FNDC3BQ53EP0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.31■■□□□ 1.32
FNDC3BQ53EP0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
FNDC3BQ53EP0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
FNDC3BQ53EP0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FNDC3BQ53EP0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
FNDC3BQ53EP0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
FNDC3BQ53EP0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.3■■□□□ 1.32
FNDC3BQ53EP0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
FNDC3BQ53EP0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FNDC3BQ53EP0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.3■■□□□ 1.32
FNDC3BQ53EP0 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FNDC3BQ53EP0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
FNDC3BQ53EP0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
FNDC3BQ53EP0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.29■■□□□ 1.32
FNDC3BQ53EP0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.29■■□□□ 1.32
FNDC3BQ53EP0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
FNDC3BQ53EP0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
FNDC3BQ53EP0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FNDC3BQ53EP0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
FNDC3BQ53EP0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
FNDC3BQ53EP0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
FNDC3BQ53EP0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
FNDC3BQ53EP0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
FNDC3BQ53EP0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.28■■□□□ 1.32
FNDC3BQ53EP0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FNDC3BQ53EP0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.28■■□□□ 1.32
FNDC3BQ53EP0 HLA-L-211ENST00000482052 1765 ntBASIC23.28■■□□□ 1.32
FNDC3BQ53EP0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.28■■□□□ 1.32
FNDC3BQ53EP0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FNDC3BQ53EP0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
FNDC3BQ53EP0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FNDC3BQ53EP0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.27■■□□□ 1.32
FNDC3BQ53EP0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
FNDC3BQ53EP0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
FNDC3BQ53EP0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.27■■□□□ 1.32
FNDC3BQ53EP0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.27■■□□□ 1.32
FNDC3BQ53EP0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.27■■□□□ 1.32
FNDC3BQ53EP0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
FNDC3BQ53EP0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
FNDC3BQ53EP0 PBX2P1-201ENST00000493219 1291 ntBASIC23.26■■□□□ 1.31
FNDC3BQ53EP0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.26■■□□□ 1.31
FNDC3BQ53EP0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.26■■□□□ 1.31
FNDC3BQ53EP0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FNDC3BQ53EP0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FNDC3BQ53EP0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
FNDC3BQ53EP0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.26■■□□□ 1.31
FNDC3BQ53EP0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
FNDC3BQ53EP0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
FNDC3BQ53EP0 UNC93B3-201ENST00000308076 687 ntBASIC23.25■■□□□ 1.31
FNDC3BQ53EP0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.25■■□□□ 1.31
FNDC3BQ53EP0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
FNDC3BQ53EP0 AC005837.3-201ENST00000612163 286 ntBASIC23.25■■□□□ 1.31
FNDC3BQ53EP0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.25■■□□□ 1.31
FNDC3BQ53EP0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FNDC3BQ53EP0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
FNDC3BQ53EP0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
FNDC3BQ53EP0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FNDC3BQ53EP0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
FNDC3BQ53EP0 AC022211.4-201ENST00000625094 2161 ntBASIC23.24■■□□□ 1.31
FNDC3BQ53EP0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
FNDC3BQ53EP0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.24■■□□□ 1.31
FNDC3BQ53EP0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms