Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
COL16A1Q07092 NME4-202ENST00000382940 766 ntTSL 3 BASIC31.75■■■□□ 2.67
COL16A1Q07092 NME4-211ENST00000620944 1193 ntTSL 2 BASIC31.75■■■□□ 2.67
COL16A1Q07092 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
COL16A1Q07092 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
COL16A1Q07092 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
COL16A1Q07092 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
COL16A1Q07092 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC31.75■■■□□ 2.67
COL16A1Q07092 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC31.75■■■□□ 2.67
COL16A1Q07092 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC31.75■■■□□ 2.67
COL16A1Q07092 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC31.75■■■□□ 2.67
COL16A1Q07092 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
COL16A1Q07092 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
COL16A1Q07092 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
COL16A1Q07092 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC31.74■■■□□ 2.67
COL16A1Q07092 TSPY26P-201ENST00000476365 1326 ntBASIC31.74■■■□□ 2.67
COL16A1Q07092 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
COL16A1Q07092 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC31.74■■■□□ 2.67
COL16A1Q07092 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
COL16A1Q07092 AL358852.1-201ENST00000623174 1268 ntBASIC31.74■■■□□ 2.67
COL16A1Q07092 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
COL16A1Q07092 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
COL16A1Q07092 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
COL16A1Q07092 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
COL16A1Q07092 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
COL16A1Q07092 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
COL16A1Q07092 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC31.73■■■□□ 2.67
COL16A1Q07092 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
COL16A1Q07092 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
COL16A1Q07092 GXYLT1P2-201ENST00000433312 1230 ntBASIC31.72■■■□□ 2.67
COL16A1Q07092 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
COL16A1Q07092 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC31.72■■■□□ 2.67
COL16A1Q07092 KRT18P14-201ENST00000534205 1250 ntBASIC31.72■■■□□ 2.67
COL16A1Q07092 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
COL16A1Q07092 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
COL16A1Q07092 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
COL16A1Q07092 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC31.71■■■□□ 2.67
COL16A1Q07092 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
COL16A1Q07092 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
COL16A1Q07092 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC31.71■■■□□ 2.67
COL16A1Q07092 MIR6084-201ENST00000622012 110 ntBASIC31.71■■■□□ 2.67
COL16A1Q07092 AC009102.2-201ENST00000606772 1639 ntBASIC31.71■■■□□ 2.67
COL16A1Q07092 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC31.71■■■□□ 2.67
COL16A1Q07092 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC31.71■■■□□ 2.67
COL16A1Q07092 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
COL16A1Q07092 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
COL16A1Q07092 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.7■■■□□ 2.67
COL16A1Q07092 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
COL16A1Q07092 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC31.7■■■□□ 2.66
COL16A1Q07092 AC104771.1-201ENST00000603335 964 ntBASIC31.7■■■□□ 2.66
COL16A1Q07092 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.7■■■□□ 2.66
COL16A1Q07092 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
COL16A1Q07092 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
COL16A1Q07092 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.7■■■□□ 2.66
COL16A1Q07092 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
COL16A1Q07092 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.69■■■□□ 2.66
COL16A1Q07092 TERF1P2-201ENST00000583350 1212 ntBASIC31.69■■■□□ 2.66
COL16A1Q07092 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC31.69■■■□□ 2.66
COL16A1Q07092 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
COL16A1Q07092 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
COL16A1Q07092 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
COL16A1Q07092 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
COL16A1Q07092 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
COL16A1Q07092 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
COL16A1Q07092 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC31.67■■■□□ 2.66
COL16A1Q07092 AC241377.3-202ENST00000626088 1088 ntBASIC31.67■■■□□ 2.66
COL16A1Q07092 AC241585.3-202ENST00000628937 1088 ntBASIC31.67■■■□□ 2.66
COL16A1Q07092 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
COL16A1Q07092 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
COL16A1Q07092 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
COL16A1Q07092 GXYLT1P5-201ENST00000614548 1189 ntBASIC31.67■■■□□ 2.66
COL16A1Q07092 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC31.67■■■□□ 2.66
COL16A1Q07092 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
COL16A1Q07092 AP004609.3-201ENST00000610705 1884 ntBASIC31.67■■■□□ 2.66
COL16A1Q07092 AC066615.1-201ENST00000640911 628 ntBASIC31.66■■■□□ 2.66
COL16A1Q07092 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.65■■■□□ 2.66
COL16A1Q07092 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC31.65■■■□□ 2.66
COL16A1Q07092 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
COL16A1Q07092 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC31.64■■■□□ 2.66
COL16A1Q07092 AC126544.1-201ENST00000580842 1059 ntBASIC31.64■■■□□ 2.66
COL16A1Q07092 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC31.64■■■□□ 2.66
COL16A1Q07092 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC31.64■■■□□ 2.65
COL16A1Q07092 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC31.64■■■□□ 2.65
COL16A1Q07092 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.65
COL16A1Q07092 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.65
COL16A1Q07092 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC31.64■■■□□ 2.65
COL16A1Q07092 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.63■■■□□ 2.65
COL16A1Q07092 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
COL16A1Q07092 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL16A1Q07092 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
COL16A1Q07092 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL16A1Q07092 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC31.63■■■□□ 2.65
COL16A1Q07092 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC31.63■■■□□ 2.65
COL16A1Q07092 MIR3181-201ENST00000578512 73 ntBASIC31.63■■■□□ 2.65
COL16A1Q07092 NTF6G-201ENST00000591094 616 ntBASIC31.63■■■□□ 2.65
COL16A1Q07092 AC073111.5-205ENST00000641717 521 ntBASIC31.63■■■□□ 2.65
COL16A1Q07092 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
COL16A1Q07092 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC31.62■■■□□ 2.65
COL16A1Q07092 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC31.62■■■□□ 2.65
COL16A1Q07092 REST-206ENST00000612429 1376 ntTSL 5 BASIC31.62■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms