Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN18P56856 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN18P56856 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLDN18P56856 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CLDN18P56856 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.65■□□□□ 0.9
CLDN18P56856 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.65■□□□□ 0.9
CLDN18P56856 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CLDN18P56856 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.65■□□□□ 0.9
CLDN18P56856 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.65■□□□□ 0.9
CLDN18P56856 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CLDN18P56856 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CLDN18P56856 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.64■□□□□ 0.9
CLDN18P56856 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN18P56856 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN18P56856 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.64■□□□□ 0.89
CLDN18P56856 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDN18P56856 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDN18P56856 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.64■□□□□ 0.89
CLDN18P56856 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.64■□□□□ 0.89
CLDN18P56856 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN18P56856 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.63■□□□□ 0.89
CLDN18P56856 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN18P56856 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN18P56856 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.63■□□□□ 0.89
CLDN18P56856 AC008406.3-201ENST00000620001 1374 ntBASIC20.63■□□□□ 0.89
CLDN18P56856 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
CLDN18P56856 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN18P56856 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN18P56856 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.63■□□□□ 0.89
CLDN18P56856 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.63■□□□□ 0.89
CLDN18P56856 AC131281.2-201ENST00000520478 145 ntBASIC20.63■□□□□ 0.89
CLDN18P56856 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN18P56856 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN18P56856 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN18P56856 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN18P56856 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN18P56856 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN18P56856 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN18P56856 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN18P56856 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CLDN18P56856 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN18P56856 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN18P56856 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN18P56856 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLDN18P56856 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN18P56856 AL161729.1-201ENST00000604104 1402 ntBASIC20.61■□□□□ 0.89
CLDN18P56856 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CLDN18P56856 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDN18P56856 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN18P56856 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN18P56856 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN18P56856 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN18P56856 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN18P56856 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN18P56856 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.6■□□□□ 0.89
CLDN18P56856 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.6■□□□□ 0.89
CLDN18P56856 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN18P56856 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CLDN18P56856 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN18P56856 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN18P56856 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN18P56856 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN18P56856 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CLDN18P56856 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN18P56856 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN18P56856 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN18P56856 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN18P56856 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN18P56856 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN18P56856 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN18P56856 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN18P56856 AC005703.6-201ENST00000623265 1329 ntBASIC20.58■□□□□ 0.89
CLDN18P56856 AC135731.1-201ENST00000569415 2548 ntBASIC20.58■□□□□ 0.89
CLDN18P56856 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN18P56856 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.58■□□□□ 0.89
CLDN18P56856 AL512631.2-201ENST00000604634 923 ntBASIC20.58■□□□□ 0.89
CLDN18P56856 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.58■□□□□ 0.89
CLDN18P56856 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.58■□□□□ 0.88
CLDN18P56856 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN18P56856 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN18P56856 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.58■□□□□ 0.88
CLDN18P56856 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN18P56856 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN18P56856 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN18P56856 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CLDN18P56856 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN18P56856 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN18P56856 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN18P56856 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN18P56856 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN18P56856 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN18P56856 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN18P56856 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.57■□□□□ 0.88
CLDN18P56856 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN18P56856 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN18P56856 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.56■□□□□ 0.88
CLDN18P56856 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN18P56856 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CLDN18P56856 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN18P56856 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms