Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 YDL124WYDL124W 939 nt5.94□□□□□ -1.46
SUB1P54000 DJP1YIR004W 1299 nt5.94□□□□□ -1.46
SUB1P54000 YRA2YKL214C 612 nt5.94□□□□□ -1.46
SUB1P54000 RGP1YDR137W 1992 nt5.94□□□□□ -1.46
SUB1P54000 ACC1YNR016C 6702 nt5.93□□□□□ -1.46
SUB1P54000 DOA1YKL213C 2148 nt5.93□□□□□ -1.46
SUB1P54000 ABF1YKL112W 2196 nt5.93□□□□□ -1.46
SUB1P54000 YPR196WYPR196W 1413 nt5.93□□□□□ -1.46
SUB1P54000 SBE2YDR351W 2595 nt5.93□□□□□ -1.46
SUB1P54000 SFI1YLL003W 2841 nt5.93□□□□□ -1.46
SUB1P54000 YDL218WYDL218W 954 nt5.93□□□□□ -1.46
SUB1P54000 RRP1YDR087C 837 nt5.93□□□□□ -1.46
SUB1P54000 CUP2YGL166W 678 nt5.93□□□□□ -1.46
SUB1P54000 DSD1YGL196W 1287 nt5.93□□□□□ -1.46
SUB1P54000 SFC1YJR095W 969 nt5.93□□□□□ -1.46
SUB1P54000 GFD1YMR255W 567 nt5.93□□□□□ -1.46
SUB1P54000 HFA1YMR207C 6372 nt5.93□□□□□ -1.46
SUB1P54000 ECM32YER176W 3366 nt5.92□□□□□ -1.46
SUB1P54000 YND1YER005W 1893 nt5.92□□□□□ -1.46
SUB1P54000 YHR182WYHR182W 2358 nt5.92□□□□□ -1.46
SUB1P54000 TYW1YPL207W 2433 nt5.92□□□□□ -1.46
SUB1P54000 VCX1YDL128W 1236 nt5.92□□□□□ -1.46
SUB1P54000 CIA2YHR122W 696 nt5.92□□□□□ -1.46
SUB1P54000 YMR122CYMR122C 375 nt5.92□□□□□ -1.46
SUB1P54000 TPP1YMR156C 717 nt5.92□□□□□ -1.46
SUB1P54000 MFM1YPL060W 1242 nt5.92□□□□□ -1.46
SUB1P54000 VID30YGL227W 2877 nt5.92□□□□□ -1.46
SUB1P54000 TSL1YML100W 3297 nt5.91□□□□□ -1.46
SUB1P54000 RAD24YER173W 1980 nt5.91□□□□□ -1.46
SUB1P54000 HRK1YOR267C 2280 nt5.91□□□□□ -1.46
SUB1P54000 SIP5YMR140W 1470 nt5.91□□□□□ -1.46
SUB1P54000 YDR187CYDR187C 519 nt5.91□□□□□ -1.46
SUB1P54000 PFA5YDR459C 1125 nt5.91□□□□□ -1.46
SUB1P54000 SEC20YDR498C 1152 nt5.91□□□□□ -1.46
SUB1P54000 VPS24YKL041W 675 nt5.91□□□□□ -1.46
SUB1P54000 RHO2YNL090W 579 nt5.91□□□□□ -1.46
SUB1P54000 YOR034C-AYOR034C-A 243 nt5.91□□□□□ -1.46
SUB1P54000 RFA1YAR007C 1866 nt5.91□□□□□ -1.46
SUB1P54000 CPS1YJL172W 1731 nt5.91□□□□□ -1.46
SUB1P54000 FMP30YPL103C 1407 nt5.91□□□□□ -1.46
SUB1P54000 MDL1YLR188W 2088 nt5.9□□□□□ -1.46
SUB1P54000 MAK31YCR020C-A 267 nt5.9□□□□□ -1.46
SUB1P54000 YDR053WYDR053W 396 nt5.9□□□□□ -1.46
SUB1P54000 ICL1YER065C 1674 nt5.9□□□□□ -1.47
SUB1P54000 TGL4YKR089C 2733 nt5.89□□□□□ -1.47
SUB1P54000 DAS2YDR020C 699 nt5.89□□□□□ -1.47
SUB1P54000 YER067C-AYER067C-A 324 nt5.89□□□□□ -1.47
SUB1P54000 MOB2YFL034C-B 864 nt5.89□□□□□ -1.47
SUB1P54000 FRA2YGL220W 363 nt5.89□□□□□ -1.47
SUB1P54000 SUP19tS(UGA)E 82 nt5.89□□□□□ -1.47
SUB1P54000 SUP17tS(UGA)I 82 nt5.89□□□□□ -1.47
SUB1P54000 SUP16tS(UGA)P 82 nt5.89□□□□□ -1.47
SUB1P54000 YIL029W-AYIL029W-A 372 nt5.89□□□□□ -1.47
SUB1P54000 PRE3YJL001W 648 nt5.89□□□□□ -1.47
SUB1P54000 SUL2YLR092W 2682 nt5.89□□□□□ -1.47
SUB1P54000 KEX1YGL203C 2190 nt5.89□□□□□ -1.47
SUB1P54000 QDR1YIL120W 1692 nt5.88□□□□□ -1.47
SUB1P54000 SIA1YOR137C 1869 nt5.88□□□□□ -1.47
SUB1P54000 AIR2YDL175C 1035 nt5.88□□□□□ -1.47
SUB1P54000 YDR109CYDR109C 2148 nt5.88□□□□□ -1.47
SUB1P54000 UTR4YEL038W 684 nt5.88□□□□□ -1.47
SUB1P54000 NAT2YGR147C 867 nt5.88□□□□□ -1.47
SUB1P54000 LYS12YIL094C 1116 nt5.88□□□□□ -1.47
SUB1P54000 RFC2YJR068W 1062 nt5.88□□□□□ -1.47
SUB1P54000 PPG1YNR032W 1107 nt5.88□□□□□ -1.47
SUB1P54000 VTC2YFL004W 2487 nt5.88□□□□□ -1.47
SUB1P54000 APE3YBR286W 1614 nt5.88□□□□□ -1.47
SUB1P54000 YRF1-4YLR466W 4149 nt5.87□□□□□ -1.47
SUB1P54000 YGR079WYGR079W 1113 nt5.87□□□□□ -1.47
SUB1P54000 ORM2YLR350W 651 nt5.87□□□□□ -1.47
SUB1P54000 PHO12YHR215W 1404 nt5.87□□□□□ -1.47
SUB1P54000 PHO11YAR071W 1404 nt5.87□□□□□ -1.47
SUB1P54000 CDC6YJL194W 1542 nt5.87□□□□□ -1.47
SUB1P54000 SAC1YKL212W 1872 nt5.87□□□□□ -1.47
SUB1P54000 YML082WYML082W 1950 nt5.87□□□□□ -1.47
SUB1P54000 SWC3YAL011W 1878 nt5.86□□□□□ -1.47
SUB1P54000 TPO2YGR138C 1845 nt5.86□□□□□ -1.47
SUB1P54000 NOC4YPR144C 1659 nt5.86□□□□□ -1.47
SUB1P54000 SAE3YHR079C-A 276 nt5.86□□□□□ -1.47
SUB1P54000 FMP33YJL161W 543 nt5.86□□□□□ -1.47
SUB1P54000 CBF1YJR060W 1056 nt5.86□□□□□ -1.47
SUB1P54000 YKR047WYKR047W 306 nt5.86□□□□□ -1.47
SUB1P54000 PSR1YLL010C 1284 nt5.86□□□□□ -1.47
SUB1P54000 NSE1YLR007W 1011 nt5.86□□□□□ -1.47
SUB1P54000 SPS19YNL202W 879 nt5.86□□□□□ -1.47
SUB1P54000 SNZ2YNL333W 897 nt5.86□□□□□ -1.47
SUB1P54000 YBR219CYBR219C 384 nt5.86□□□□□ -1.47
SUB1P54000 LPP1YDR503C 825 nt5.85□□□□□ -1.47
SUB1P54000 MMS2YGL087C 414 nt5.85□□□□□ -1.47
SUB1P54000 URA1YKL216W 945 nt5.85□□□□□ -1.47
SUB1P54000 YLL017WYLL017W 312 nt5.85□□□□□ -1.47
SUB1P54000 CAF40YNL288W 1122 nt5.85□□□□□ -1.47
SUB1P54000 ERI1YPL096C-A 207 nt5.85□□□□□ -1.47
SUB1P54000 YPR015CYPR015C 744 nt5.85□□□□□ -1.47
SUB1P54000 YPR098CYPR098C 486 nt5.85□□□□□ -1.47
SUB1P54000 BSD2YBR290W 966 nt5.85□□□□□ -1.47
SUB1P54000 HPF1YOL155C 2904 nt5.85□□□□□ -1.47
SUB1P54000 SYG1YIL047C 2709 nt5.85□□□□□ -1.47
SUB1P54000 PDC1YLR044C 1692 nt5.85□□□□□ -1.47
SUB1P54000 ENT1YDL161W 1365 nt5.84□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms