Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 DPB2YPR175W 2070 nt4.39□□□□□ -1.71
SSU72P53538 BRL1YHR036W 1416 nt4.38□□□□□ -1.71
SSU72P53538 RPT1YKL145W 1404 nt4.38□□□□□ -1.71
SSU72P53538 RML2YEL050C 1182 nt4.38□□□□□ -1.71
SSU72P53538 YER187WYER187W 426 nt4.38□□□□□ -1.71
SSU72P53538 IMP2YMR035W 534 nt4.38□□□□□ -1.71
SSU72P53538 TUB3YML124C 1338 nt4.38□□□□□ -1.71
SSU72P53538 PAL1YDR348C 1500 nt4.37□□□□□ -1.71
SSU72P53538 YCR097W-AYCR097W-A 267 nt4.37□□□□□ -1.71
SSU72P53538 GIR2YDR152W 798 nt4.37□□□□□ -1.71
SSU72P53538 YGR022CYGR022C 330 nt4.37□□□□□ -1.71
SSU72P53538 REC114YMR133W 1287 nt4.37□□□□□ -1.71
SSU72P53538 SCP1YOR367W 603 nt4.37□□□□□ -1.71
SSU72P53538 snR19snR19 568 nt4.37□□□□□ -1.71
SSU72P53538 MRPL36YBR122C 534 nt4.37□□□□□ -1.71
SSU72P53538 AVT1YJR001W 1809 nt4.37□□□□□ -1.71
SSU72P53538 CAF4YKR036C 1932 nt4.36□□□□□ -1.71
SSU72P53538 IZH3YLR023C 1632 nt4.36□□□□□ -1.71
SSU72P53538 KIP2YPL155C 2121 nt4.36□□□□□ -1.71
SSU72P53538 KCC4YCL024W 3114 nt4.36□□□□□ -1.71
SSU72P53538 GCS1YDL226C 1059 nt4.36□□□□□ -1.71
SSU72P53538 YIL028WYIL028W 399 nt4.36□□□□□ -1.71
SSU72P53538 MRPL22YNL177C 930 nt4.36□□□□□ -1.71
SSU72P53538 ULA1YPL003W 1389 nt4.36□□□□□ -1.71
SSU72P53538 GUS1YGL245W 2127 nt4.36□□□□□ -1.71
SSU72P53538 SRV2YNL138W 1581 nt4.36□□□□□ -1.71
SSU72P53538 BIT2YBR270C 1638 nt4.35□□□□□ -1.71
SSU72P53538 DCV1YFR012W 609 nt4.35□□□□□ -1.71
SSU72P53538 RFU1YLR073C 603 nt4.35□□□□□ -1.71
SSU72P53538 LEM3YNL323W 1245 nt4.35□□□□□ -1.71
SSU72P53538 RMI1YPL024W 726 nt4.35□□□□□ -1.71
SSU72P53538 ARR3YPR201W 1215 nt4.35□□□□□ -1.71
SSU72P53538 YHR045WYHR045W 1683 nt4.35□□□□□ -1.71
SSU72P53538 YDL119CYDL119C 924 nt4.34□□□□□ -1.71
SSU72P53538 CAD1YDR423C 1230 nt4.34□□□□□ -1.71
SSU72P53538 tN(GUU)CtN(GUU)C 74 nt4.34□□□□□ -1.71
SSU72P53538 tN(GUU)FtN(GUU)F 74 nt4.34□□□□□ -1.71
SSU72P53538 tN(GUU)GtN(GUU)G 74 nt4.34□□□□□ -1.71
SSU72P53538 tN(GUU)KtN(GUU)K 74 nt4.34□□□□□ -1.71
SSU72P53538 tN(GUU)LtN(GUU)L 74 nt4.34□□□□□ -1.71
SSU72P53538 tN(GUU)N1tN(GUU)N1 74 nt4.34□□□□□ -1.71
SSU72P53538 tN(GUU)N2tN(GUU)N2 74 nt4.34□□□□□ -1.71
SSU72P53538 tN(GUU)O1tN(GUU)O1 74 nt4.34□□□□□ -1.71
SSU72P53538 tN(GUU)O2tN(GUU)O2 74 nt4.34□□□□□ -1.71
SSU72P53538 tN(GUU)PtN(GUU)P 74 nt4.34□□□□□ -1.71
SSU72P53538 MTW1YAL034W-A 870 nt4.34□□□□□ -1.71
SSU72P53538 YKL169CYKL169C 384 nt4.34□□□□□ -1.71
SSU72P53538 ATG17YLR423C 1254 nt4.34□□□□□ -1.71
SSU72P53538 LST8YNL006W 912 nt4.34□□□□□ -1.71
SSU72P53538 YNR075C-AYNR075C-A 93 nt4.34□□□□□ -1.71
SSU72P53538 DCI1YOR180C 816 nt4.34□□□□□ -1.71
SSU72P53538 ECM2YBR065C 1095 nt4.34□□□□□ -1.71
SSU72P53538 STE50YCL032W 1041 nt4.34□□□□□ -1.71
SSU72P53538 IFM1YOL023W 2031 nt4.33□□□□□ -1.72
SSU72P53538 SKM1YOL113W 1968 nt4.33□□□□□ -1.72
SSU72P53538 YND1YER005W 1893 nt4.33□□□□□ -1.72
SSU72P53538 VHS1YDR247W 1386 nt4.33□□□□□ -1.72
SSU72P53538 YDL034WYDL034W 345 nt4.33□□□□□ -1.72
SSU72P53538 MND2YIR025W 1107 nt4.33□□□□□ -1.72
SSU72P53538 RPA49YNL248C 1248 nt4.33□□□□□ -1.72
SSU72P53538 YBR056C-BYBR056C-B 159 nt4.33□□□□□ -1.72
SSU72P53538 CBC2YPL178W 627 nt4.33□□□□□ -1.72
SSU72P53538 YFL034WYFL034W 3222 nt4.33□□□□□ -1.72
SSU72P53538 SSA2YLL024C 1920 nt4.33□□□□□ -1.72
SSU72P53538 LCB2YDR062W 1686 nt4.32□□□□□ -1.72
SSU72P53538 PDR5YOR153W 4536 nt4.32□□□□□ -1.72
SSU72P53538 TPS3YMR261C 3165 nt4.32□□□□□ -1.72
SSU72P53538 TFC7YOR110W 1308 nt4.32□□□□□ -1.72
SSU72P53538 DAM1YGR113W 1032 nt4.32□□□□□ -1.72
SSU72P53538 YKR104WYKR104W 921 nt4.32□□□□□ -1.72
SSU72P53538 ORM2YLR350W 651 nt4.32□□□□□ -1.72
SSU72P53538 DAL82YNL314W 768 nt4.32□□□□□ -1.72
SSU72P53538 MRP21YBL090W 534 nt4.32□□□□□ -1.72
SSU72P53538 SCO1YBR037C 888 nt4.32□□□□□ -1.72
SSU72P53538 YPL113CYPL113C 1191 nt4.32□□□□□ -1.72
SSU72P53538 OM14YBR230C 405 nt4.32□□□□□ -1.72
SSU72P53538 LYS2YBR115C 4179 nt4.32□□□□□ -1.72
SSU72P53538 CBP1YJL209W 1965 nt4.31□□□□□ -1.72
SSU72P53538 NOT3YIL038C 2511 nt4.31□□□□□ -1.72
SSU72P53538 YDR274CYDR274C 372 nt4.31□□□□□ -1.72
SSU72P53538 REV7YIL139C 738 nt4.31□□□□□ -1.72
SSU72P53538 PRP28YDR243C 1767 nt4.31□□□□□ -1.72
SSU72P53538 TOS4YLR183C 1470 nt4.3□□□□□ -1.72
SSU72P53538 MMP1YLL061W 1752 nt4.3□□□□□ -1.72
SSU72P53538 ATG23YLR431C 1362 nt4.3□□□□□ -1.72
SSU72P53538 RTT106YNL206C 1368 nt4.3□□□□□ -1.72
SSU72P53538 MDR1YGR100W 2853 nt4.3□□□□□ -1.72
SSU72P53538 SPR28YDR218C 1272 nt4.3□□□□□ -1.72
SSU72P53538 YOL097W-AYOL097W-A 186 nt4.3□□□□□ -1.72
SSU72P53538 RIM21YNL294C 1602 nt4.3□□□□□ -1.72
SSU72P53538 SLT2YHR030C 1455 nt4.3□□□□□ -1.72
SSU72P53538 HIS4YCL030C 2400 nt4.3□□□□□ -1.72
SSU72P53538 TEL1YBL088C 8364 nt4.29□□□□□ -1.72
SSU72P53538 PDR15YDR406W 4590 nt4.29□□□□□ -1.72
SSU72P53538 YEL009C-AYEL009C-A 408 nt4.29□□□□□ -1.72
SSU72P53538 BNS1YGR230W 414 nt4.29□□□□□ -1.72
SSU72P53538 EGD2YHR193C 525 nt4.29□□□□□ -1.72
SSU72P53538 YJL211CYJL211C 444 nt4.29□□□□□ -1.72
SSU72P53538 NOP13YNL175C 1212 nt4.29□□□□□ -1.72
SSU72P53538 ROX3YBL093C 663 nt4.29□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms