Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSR4P51571 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSR4P51571 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSR4P51571 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SSR4P51571 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SSR4P51571 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SSR4P51571 AC005703.6-201ENST00000623265 1329 ntBASIC21.16■□□□□ 0.98
SSR4P51571 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SSR4P51571 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.16■□□□□ 0.98
SSR4P51571 AC131281.2-201ENST00000520478 145 ntBASIC21.16■□□□□ 0.98
SSR4P51571 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.16■□□□□ 0.98
SSR4P51571 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SSR4P51571 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR4P51571 AL161729.1-201ENST00000604104 1402 ntBASIC21.15■□□□□ 0.98
SSR4P51571 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.15■□□□□ 0.98
SSR4P51571 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.15■□□□□ 0.98
SSR4P51571 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSR4P51571 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR4P51571 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SSR4P51571 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SSR4P51571 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.15■□□□□ 0.98
SSR4P51571 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SSR4P51571 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.15■□□□□ 0.98
SSR4P51571 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.15■□□□□ 0.98
SSR4P51571 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.15■□□□□ 0.98
SSR4P51571 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSR4P51571 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SSR4P51571 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SSR4P51571 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SSR4P51571 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSR4P51571 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSR4P51571 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSR4P51571 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSR4P51571 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.14■□□□□ 0.97
SSR4P51571 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SSR4P51571 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.14■□□□□ 0.97
SSR4P51571 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.14■□□□□ 0.97
SSR4P51571 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.14■□□□□ 0.97
SSR4P51571 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.14■□□□□ 0.97
SSR4P51571 AC020928.2-201ENST00000588717 2197 ntBASIC21.14■□□□□ 0.97
SSR4P51571 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SSR4P51571 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SSR4P51571 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SSR4P51571 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR4P51571 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.13■□□□□ 0.97
SSR4P51571 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.13■□□□□ 0.97
SSR4P51571 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR4P51571 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SSR4P51571 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSR4P51571 AC138932.3-201ENST00000567634 1902 ntBASIC21.12■□□□□ 0.97
SSR4P51571 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSR4P51571 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SSR4P51571 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.12■□□□□ 0.97
SSR4P51571 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSR4P51571 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
SSR4P51571 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SSR4P51571 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSR4P51571 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSR4P51571 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.12■□□□□ 0.97
SSR4P51571 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSR4P51571 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SSR4P51571 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SSR4P51571 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR4P51571 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSR4P51571 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.11■□□□□ 0.97
SSR4P51571 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.11■□□□□ 0.97
SSR4P51571 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR4P51571 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSR4P51571 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSR4P51571 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.11■□□□□ 0.97
SSR4P51571 AL136116.3-201ENST00000402907 1138 ntBASIC21.11■□□□□ 0.97
SSR4P51571 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.11■□□□□ 0.97
SSR4P51571 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSR4P51571 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SSR4P51571 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR4P51571 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSR4P51571 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.1■□□□□ 0.97
SSR4P51571 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSR4P51571 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR4P51571 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.1■□□□□ 0.97
SSR4P51571 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SSR4P51571 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.1■□□□□ 0.97
SSR4P51571 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR4P51571 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSR4P51571 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR4P51571 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.09■□□□□ 0.97
SSR4P51571 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR4P51571 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR4P51571 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR4P51571 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SSR4P51571 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR4P51571 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SSR4P51571 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.09■□□□□ 0.97
SSR4P51571 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR4P51571 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR4P51571 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR4P51571 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SSR4P51571 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.09■□□□□ 0.97
SSR4P51571 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SSR4P51571 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms