Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 PMA1YGL008C 2757 nt4.78□□□□□ -1.64
SSN8P47821 CTT1YGR088W 1689 nt4.78□□□□□ -1.64
SSN8P47821 GLO2YDR272W 825 nt4.78□□□□□ -1.64
SSN8P47821 YHL049CYHL049C 816 nt4.78□□□□□ -1.64
SSN8P47821 PAN6YIL145C 930 nt4.78□□□□□ -1.64
SSN8P47821 YKR041WYKR041W 753 nt4.78□□□□□ -1.64
SSN8P47821 MRP21YBL090W 534 nt4.78□□□□□ -1.64
SSN8P47821 ORC5YNL261W 1440 nt4.78□□□□□ -1.64
SSN8P47821 PRP28YDR243C 1767 nt4.78□□□□□ -1.64
SSN8P47821 STE7YDL159W 1548 nt4.77□□□□□ -1.65
SSN8P47821 YCR047W-AYCR047W-A 207 nt4.77□□□□□ -1.65
SSN8P47821 CDC43YGL155W 1131 nt4.77□□□□□ -1.65
SSN8P47821 NCE103YNL036W 666 nt4.77□□□□□ -1.65
SSN8P47821 ATG32YIL146C 1590 nt4.77□□□□□ -1.65
SSN8P47821 MDM34YGL219C 1380 nt4.77□□□□□ -1.65
SSN8P47821 SNT2YGL131C 4212 nt4.77□□□□□ -1.65
SSN8P47821 SED4YCR067C 3198 nt4.76□□□□□ -1.65
SSN8P47821 KRS1YDR037W 1776 nt4.76□□□□□ -1.65
SSN8P47821 GIP1YBR045C 1920 nt4.76□□□□□ -1.65
SSN8P47821 YMR196WYMR196W 3267 nt4.76□□□□□ -1.65
SSN8P47821 RSM10YDR041W 612 nt4.76□□□□□ -1.65
SSN8P47821 RML2YEL050C 1182 nt4.76□□□□□ -1.65
SSN8P47821 DCI1YOR180C 816 nt4.76□□□□□ -1.65
SSN8P47821 UIP4YPL186C 915 nt4.76□□□□□ -1.65
SSN8P47821 SAP155YFR040W 3009 nt4.76□□□□□ -1.65
SSN8P47821 PRT1YOR361C 2292 nt4.76□□□□□ -1.65
SSN8P47821 MCH4YOL119C 1506 nt4.76□□□□□ -1.65
SSN8P47821 LEU1YGL009C 2340 nt4.75□□□□□ -1.65
SSN8P47821 ISR1YPR106W 1332 nt4.75□□□□□ -1.65
SSN8P47821 FRE7YOL152W 1863 nt4.75□□□□□ -1.65
SSN8P47821 HXT3YDR345C 1704 nt4.75□□□□□ -1.65
SSN8P47821 TPO2YGR138C 1845 nt4.75□□□□□ -1.65
SSN8P47821 NQM1YGR043C 1002 nt4.75□□□□□ -1.65
SSN8P47821 MAD2YJL030W 591 nt4.75□□□□□ -1.65
SSN8P47821 YJL107CYJL107C 1164 nt4.75□□□□□ -1.65
SSN8P47821 SEC13YLR208W 894 nt4.75□□□□□ -1.65
SSN8P47821 LCB2YDR062W 1686 nt4.75□□□□□ -1.65
SSN8P47821 MPC54YOR177C 1395 nt4.75□□□□□ -1.65
SSN8P47821 YJR124CYJR124C 1347 nt4.74□□□□□ -1.65
SSN8P47821 THI20YOL055C 1656 nt4.74□□□□□ -1.65
SSN8P47821 AAD6YFL056C 639 nt4.74□□□□□ -1.65
SSN8P47821 YBL029WYBL029W 1131 nt4.74□□□□□ -1.65
SSN8P47821 SNO4YMR322C 714 nt4.74□□□□□ -1.65
SSN8P47821 HSP33YOR391C 714 nt4.74□□□□□ -1.65
SSN8P47821 HSP32YPL280W 714 nt4.74□□□□□ -1.65
SSN8P47821 CTR1YPR124W 1221 nt4.74□□□□□ -1.65
SSN8P47821 TEF1YPR080W 1377 nt4.74□□□□□ -1.65
SSN8P47821 TEF2YBR118W 1377 nt4.74□□□□□ -1.65
SSN8P47821 TRM44YPL030W 1704 nt4.74□□□□□ -1.65
SSN8P47821 STR2YJR130C 1920 nt4.74□□□□□ -1.65
SSN8P47821 GLT1YDL171C 6438 nt4.73□□□□□ -1.65
SSN8P47821 UTP6YDR449C 1323 nt4.73□□□□□ -1.65
SSN8P47821 ATR1YML116W 1629 nt4.73□□□□□ -1.65
SSN8P47821 RIM21YNL294C 1602 nt4.73□□□□□ -1.65
SSN8P47821 YDR154CYDR154C 351 nt4.73□□□□□ -1.65
SSN8P47821 YEL028WYEL028W 462 nt4.73□□□□□ -1.65
SSN8P47821 YGL118CYGL118C 438 nt4.73□□□□□ -1.65
SSN8P47821 TEF4YKL081W 1239 nt4.73□□□□□ -1.65
SSN8P47821 SEN34YAR008W 828 nt4.73□□□□□ -1.65
SSN8P47821 MAC1YMR021C 1254 nt4.73□□□□□ -1.65
SSN8P47821 YBL044WYBL044W 369 nt4.73□□□□□ -1.65
SSN8P47821 DAK1YML070W 1755 nt4.73□□□□□ -1.65
SSN8P47821 FAA4YMR246W 2085 nt4.73□□□□□ -1.65
SSN8P47821 ZUO1YGR285C 1302 nt4.72□□□□□ -1.65
SSN8P47821 SVF1YDR346C 1446 nt4.72□□□□□ -1.65
SSN8P47821 RPT1YKL145W 1404 nt4.72□□□□□ -1.65
SSN8P47821 GCR2YNL199C 1605 nt4.72□□□□□ -1.65
SSN8P47821 SSB1YDL229W 1842 nt4.72□□□□□ -1.65
SSN8P47821 SSB2YNL209W 1842 nt4.72□□□□□ -1.65
SSN8P47821 UBC6YER100W 753 nt4.72□□□□□ -1.65
SSN8P47821 SPO74YGL170C 1242 nt4.72□□□□□ -1.65
SSN8P47821 PGA3YML125C 939 nt4.72□□□□□ -1.65
SSN8P47821 SHP1YBL058W 1272 nt4.72□□□□□ -1.65
SSN8P47821 HER2YMR293C 1395 nt4.72□□□□□ -1.65
SSN8P47821 UTP7YER082C 1665 nt4.72□□□□□ -1.65
SSN8P47821 TGL4YKR089C 2733 nt4.71□□□□□ -1.66
SSN8P47821 SLD2YKL108W 1362 nt4.71□□□□□ -1.66
SSN8P47821 SNM1YDR478W 597 nt4.71□□□□□ -1.66
SSN8P47821 CSR1YLR380W 1227 nt4.71□□□□□ -1.66
SSN8P47821 YOR289WYOR289W 756 nt4.71□□□□□ -1.66
SSN8P47821 CBC2YPL178W 627 nt4.71□□□□□ -1.66
SSN8P47821 YPR109WYPR109W 885 nt4.71□□□□□ -1.66
SSN8P47821 STE12YHR084W 2067 nt4.71□□□□□ -1.66
SSN8P47821 YJL206CYJL206C 2277 nt4.7□□□□□ -1.66
SSN8P47821 RSM23YGL129C 1353 nt4.7□□□□□ -1.66
SSN8P47821 YDL144CYDL144C 1071 nt4.7□□□□□ -1.66
SSN8P47821 MTQ2YDR140W 666 nt4.7□□□□□ -1.66
SSN8P47821 SKI8YGL213C 1194 nt4.7□□□□□ -1.66
SSN8P47821 MTW1YAL034W-A 870 nt4.7□□□□□ -1.66
SSN8P47821 DBR1YKL149C 1218 nt4.7□□□□□ -1.66
SSN8P47821 PSR1YLL010C 1284 nt4.7□□□□□ -1.66
SSN8P47821 YLL017WYLL017W 312 nt4.7□□□□□ -1.66
SSN8P47821 YET2YMR040W 483 nt4.7□□□□□ -1.66
SSN8P47821 OSW5YMR148W 447 nt4.7□□□□□ -1.66
SSN8P47821 YPL102CYPL102C 303 nt4.7□□□□□ -1.66
SSN8P47821 CLD1YGR110W 1338 nt4.7□□□□□ -1.66
SSN8P47821 PGM2YMR105C 1710 nt4.69□□□□□ -1.66
SSN8P47821 AXL2YIL140W 2472 nt4.69□□□□□ -1.66
SSN8P47821 MST1YKL194C 1389 nt4.69□□□□□ -1.66
SSN8P47821 DNF2YDR093W 4839 nt4.69□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms