Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 HXT14YNL318C 1623 nt3.83□□□□□ -1.8
VPS55P47111 AXL2YIL140W 2472 nt3.82□□□□□ -1.8
VPS55P47111 SEC9YGR009C 1956 nt3.82□□□□□ -1.8
VPS55P47111 PEX29YDR479C 1665 nt3.82□□□□□ -1.8
VPS55P47111 YJR124CYJR124C 1347 nt3.82□□□□□ -1.8
VPS55P47111 NOP16YER002W 696 nt3.82□□□□□ -1.8
VPS55P47111 ZPS1YOL154W 750 nt3.82□□□□□ -1.8
VPS55P47111 YBR016WYBR016W 387 nt3.82□□□□□ -1.8
VPS55P47111 YPL199CYPL199C 723 nt3.82□□□□□ -1.8
VPS55P47111 MDR1YGR100W 2853 nt3.82□□□□□ -1.8
VPS55P47111 MGS1YNL218W 1764 nt3.81□□□□□ -1.8
VPS55P47111 RAD16YBR114W 2373 nt3.81□□□□□ -1.8
VPS55P47111 YCR075W-AYCR075W-A 228 nt3.81□□□□□ -1.8
VPS55P47111 AAD4YDL243C 990 nt3.81□□□□□ -1.8
VPS55P47111 TRS23YDR246W 660 nt3.81□□□□□ -1.8
VPS55P47111 AUA1YFL010W-A 285 nt3.81□□□□□ -1.8
VPS55P47111 TRX2YGR209C 315 nt3.81□□□□□ -1.8
VPS55P47111 ATG33YLR356W 594 nt3.81□□□□□ -1.8
VPS55P47111 YNL174WYNL174W 573 nt3.81□□□□□ -1.8
VPS55P47111 ARG8YOL140W 1272 nt3.81□□□□□ -1.8
VPS55P47111 MET31YPL038W 534 nt3.81□□□□□ -1.8
VPS55P47111 TGS1YPL157W 948 nt3.81□□□□□ -1.8
VPS55P47111 HRR25YPL204W 1485 nt3.8□□□□□ -1.8
VPS55P47111 MMT2YPL224C 1455 nt3.8□□□□□ -1.8
VPS55P47111 YPL277CYPL277C 1464 nt3.8□□□□□ -1.8
VPS55P47111 YGL072CYGL072C 360 nt3.8□□□□□ -1.8
VPS55P47111 ECM15YBL001C 315 nt3.8□□□□□ -1.8
VPS55P47111 YMR245WYMR245W 621 nt3.8□□□□□ -1.8
VPS55P47111 YAP1802YGR241C 1707 nt3.8□□□□□ -1.8
VPS55P47111 DOA1YKL213C 2148 nt3.8□□□□□ -1.8
VPS55P47111 CHS5YLR330W 2016 nt3.8□□□□□ -1.8
VPS55P47111 RCK1YGL158W 1539 nt3.8□□□□□ -1.8
VPS55P47111 PUT1YLR142W 1431 nt3.79□□□□□ -1.8
VPS55P47111 MOT2YER068W 1764 nt3.79□□□□□ -1.8
VPS55P47111 snR17bsnR17b 332 nt3.79□□□□□ -1.8
VPS55P47111 TFB4YPR056W 1017 nt3.79□□□□□ -1.8
VPS55P47111 BUD22YMR014W 1560 nt3.79□□□□□ -1.8
VPS55P47111 ROT2YBR229C 2865 nt3.79□□□□□ -1.8
VPS55P47111 YMR102CYMR102C 2505 nt3.79□□□□□ -1.8
VPS55P47111 SFI1YLL003W 2841 nt3.79□□□□□ -1.8
VPS55P47111 FAP1YNL023C 2898 nt3.78□□□□□ -1.8
VPS55P47111 SLC1YDL052C 912 nt3.78□□□□□ -1.8
VPS55P47111 MHF2YDL160C-A 243 nt3.78□□□□□ -1.8
VPS55P47111 RPL34AYER056C-A 366 nt3.78□□□□□ -1.8
VPS55P47111 COX17YLL009C 210 nt3.78□□□□□ -1.8
VPS55P47111 MRPL39YML009C 213 nt3.78□□□□□ -1.8
VPS55P47111 MDG1YNL173C 1101 nt3.78□□□□□ -1.8
VPS55P47111 PGM2YMR105C 1710 nt3.78□□□□□ -1.8
VPS55P47111 VMS1YDR049W 1899 nt3.77□□□□□ -1.81
VPS55P47111 PRO2YOR323C 1371 nt3.77□□□□□ -1.81
VPS55P47111 UBX7YBR273C 1311 nt3.77□□□□□ -1.81
VPS55P47111 SNF2YOR290C 5112 nt3.77□□□□□ -1.81
VPS55P47111 RSC2YLR357W 2670 nt3.77□□□□□ -1.81
VPS55P47111 YEL053W-AYEL053W-A 348 nt3.77□□□□□ -1.81
VPS55P47111 RPL28YGL103W 450 nt3.77□□□□□ -1.81
VPS55P47111 RMR1YGL250W 726 nt3.77□□□□□ -1.81
VPS55P47111 CTR2YHR175W 570 nt3.77□□□□□ -1.81
VPS55P47111 TEF4YKL081W 1239 nt3.77□□□□□ -1.81
VPS55P47111 MIM2YLR099W-A 264 nt3.77□□□□□ -1.81
VPS55P47111 YCL021W-AYCL021W-A 378 nt3.77□□□□□ -1.81
VPS55P47111 KRE6YPR159W 2163 nt3.76□□□□□ -1.81
VPS55P47111 FOB1YDR110W 1701 nt3.76□□□□□ -1.81
VPS55P47111 MSC7YHR039C 1935 nt3.76□□□□□ -1.81
VPS55P47111 GCN20YFR009W 2259 nt3.76□□□□□ -1.81
VPS55P47111 ARN2YHL047C 1863 nt3.76□□□□□ -1.81
VPS55P47111 RSC6YCR052W 1452 nt3.76□□□□□ -1.81
VPS55P47111 AIR2YDL175C 1035 nt3.76□□□□□ -1.81
VPS55P47111 YDR417CYDR417C 372 nt3.76□□□□□ -1.81
VPS55P47111 YMR105W-AYMR105W-A 195 nt3.76□□□□□ -1.81
VPS55P47111 TLG2YOL018C 1194 nt3.76□□□□□ -1.81
VPS55P47111 QCR2YPR191W 1107 nt3.76□□□□□ -1.81
VPS55P47111 DDC1YPL194W 1839 nt3.76□□□□□ -1.81
VPS55P47111 HOT1YMR172W 2160 nt3.76□□□□□ -1.81
VPS55P47111 PRM1YNL279W 1986 nt3.76□□□□□ -1.81
VPS55P47111 SNF3YDL194W 2655 nt3.76□□□□□ -1.81
VPS55P47111 BUD7YOR299W 2241 nt3.75□□□□□ -1.81
VPS55P47111 TUB3YML124C 1338 nt3.75□□□□□ -1.81
VPS55P47111 YDL027CYDL027C 1263 nt3.75□□□□□ -1.81
VPS55P47111 GRE1YPL223C 507 nt3.75□□□□□ -1.81
VPS55P47111 NHP6AYPR052C 282 nt3.75□□□□□ -1.81
VPS55P47111 SEG2YKL105C 3399 nt3.75□□□□□ -1.81
VPS55P47111 UTP9YHR196W 1728 nt3.75□□□□□ -1.81
VPS55P47111 YGR266WYGR266W 2106 nt3.74□□□□□ -1.81
VPS55P47111 AFT1YGL071W 2073 nt3.74□□□□□ -1.81
VPS55P47111 SRP101YDR292C 1866 nt3.74□□□□□ -1.81
VPS55P47111 SCS2YER120W 735 nt3.74□□□□□ -1.81
VPS55P47111 YML057C-AYML057C-A 390 nt3.74□□□□□ -1.81
VPS55P47111 SEC17YBL050W 879 nt3.74□□□□□ -1.81
VPS55P47111 COG5YNL051W 1212 nt3.74□□□□□ -1.81
VPS55P47111 YIF1YNL263C 945 nt3.74□□□□□ -1.81
VPS55P47111 MGR2YPL098C 342 nt3.74□□□□□ -1.81
VPS55P47111 YPL113CYPL113C 1191 nt3.74□□□□□ -1.81
VPS55P47111 ATH1YPR026W 3636 nt3.74□□□□□ -1.81
VPS55P47111 MNT2YGL257C 1677 nt3.74□□□□□ -1.81
VPS55P47111 NUP1YOR098C 3231 nt3.73□□□□□ -1.81
VPS55P47111 IMD3YLR432W 1572 nt3.73□□□□□ -1.81
VPS55P47111 CDC16YKL022C 2523 nt3.73□□□□□ -1.81
VPS55P47111 YDL023CYDL023C 321 nt3.73□□□□□ -1.81
VPS55P47111 AIF1YNR074C 1137 nt3.73□□□□□ -1.81
VPS55P47111 YPL191CYPL191C 1083 nt3.73□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms