Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
KCNA3P22001 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC28.7■■■□□ 2.18
KCNA3P22001 BX842568.3-201ENST00000418104 571 ntBASIC28.7■■■□□ 2.18
KCNA3P22001 DLX3-202ENST00000512495 834 ntTSL 2 BASIC28.7■■■□□ 2.18
KCNA3P22001 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
KCNA3P22001 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
KCNA3P22001 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
KCNA3P22001 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC28.69■■■□□ 2.18
KCNA3P22001 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
KCNA3P22001 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
KCNA3P22001 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
KCNA3P22001 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
KCNA3P22001 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
KCNA3P22001 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
KCNA3P22001 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
KCNA3P22001 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
KCNA3P22001 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
KCNA3P22001 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.68■■■□□ 2.18
KCNA3P22001 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
KCNA3P22001 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
KCNA3P22001 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
KCNA3P22001 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.67■■■□□ 2.18
KCNA3P22001 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
KCNA3P22001 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC28.67■■■□□ 2.18
KCNA3P22001 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC28.67■■■□□ 2.18
KCNA3P22001 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
KCNA3P22001 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
KCNA3P22001 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
KCNA3P22001 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.66■■■□□ 2.18
KCNA3P22001 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
KCNA3P22001 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC28.66■■■□□ 2.18
KCNA3P22001 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC28.66■■■□□ 2.18
KCNA3P22001 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC28.66■■■□□ 2.18
KCNA3P22001 GRAMD4P2-201ENST00000423297 1097 ntBASIC28.66■■■□□ 2.18
KCNA3P22001 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.66■■■□□ 2.18
KCNA3P22001 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
KCNA3P22001 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.66■■■□□ 2.18
KCNA3P22001 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
KCNA3P22001 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
KCNA3P22001 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
KCNA3P22001 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
KCNA3P22001 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
KCNA3P22001 AC006455.2-201ENST00000429931 906 ntBASIC28.65■■■□□ 2.18
KCNA3P22001 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC28.65■■■□□ 2.18
KCNA3P22001 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
KCNA3P22001 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.65■■■□□ 2.18
KCNA3P22001 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
KCNA3P22001 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
KCNA3P22001 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
KCNA3P22001 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC28.64■■■□□ 2.18
KCNA3P22001 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
KCNA3P22001 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
KCNA3P22001 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.64■■■□□ 2.18
KCNA3P22001 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
KCNA3P22001 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC28.64■■■□□ 2.18
KCNA3P22001 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC28.64■■■□□ 2.18
KCNA3P22001 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
KCNA3P22001 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
KCNA3P22001 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC28.64■■■□□ 2.17
KCNA3P22001 C17orf82-201ENST00000623772 1530 ntBASIC28.64■■■□□ 2.17
KCNA3P22001 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC28.63■■■□□ 2.17
KCNA3P22001 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
KCNA3P22001 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.63■■■□□ 2.17
KCNA3P22001 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
KCNA3P22001 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.62■■■□□ 2.17
KCNA3P22001 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
KCNA3P22001 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
KCNA3P22001 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
KCNA3P22001 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
KCNA3P22001 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC28.62■■■□□ 2.17
KCNA3P22001 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC28.62■■■□□ 2.17
KCNA3P22001 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC28.62■■■□□ 2.17
KCNA3P22001 AC131274.2-201ENST00000580697 1507 ntBASIC28.62■■■□□ 2.17
KCNA3P22001 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.62■■■□□ 2.17
KCNA3P22001 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.61■■■□□ 2.17
KCNA3P22001 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
KCNA3P22001 SNX3-202ENST00000349379 890 ntTSL 2 BASIC28.61■■■□□ 2.17
KCNA3P22001 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC28.61■■■□□ 2.17
KCNA3P22001 MIR3181-201ENST00000578512 73 ntBASIC28.61■■■□□ 2.17
KCNA3P22001 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
KCNA3P22001 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.61■■■□□ 2.17
KCNA3P22001 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
KCNA3P22001 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
KCNA3P22001 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
KCNA3P22001 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.6■■■□□ 2.17
KCNA3P22001 AC097639.1-201ENST00000565519 1891 ntBASIC28.59■■■□□ 2.17
KCNA3P22001 AC096887.2-201ENST00000623443 1957 ntBASIC28.59■■■□□ 2.17
KCNA3P22001 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
KCNA3P22001 VPS53-216ENST00000574029 585 ntTSL 4 BASIC28.59■■■□□ 2.17
KCNA3P22001 AC241377.3-202ENST00000626088 1088 ntBASIC28.59■■■□□ 2.17
KCNA3P22001 AC241585.3-202ENST00000628937 1088 ntBASIC28.59■■■□□ 2.17
KCNA3P22001 AC245100.8-202ENST00000629247 1058 ntBASIC28.59■■■□□ 2.17
KCNA3P22001 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC28.59■■■□□ 2.17
KCNA3P22001 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
KCNA3P22001 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.58■■■□□ 2.17
KCNA3P22001 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
KCNA3P22001 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
KCNA3P22001 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
KCNA3P22001 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
KCNA3P22001 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms