Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.07■□□□□ 0.96
CCL3P10147 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.07■□□□□ 0.96
CCL3P10147 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCL3P10147 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL3P10147 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL3P10147 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL3P10147 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCL3P10147 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL3P10147 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCL3P10147 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCL3P10147 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.06■□□□□ 0.96
CCL3P10147 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.06■□□□□ 0.96
CCL3P10147 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.06■□□□□ 0.96
CCL3P10147 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
CCL3P10147 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL3P10147 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL3P10147 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL3P10147 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CCL3P10147 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL3P10147 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.05■□□□□ 0.96
CCL3P10147 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.05■□□□□ 0.96
CCL3P10147 AL356740.2-201ENST00000601559 647 ntBASIC21.05■□□□□ 0.96
CCL3P10147 AC008406.3-201ENST00000620001 1374 ntBASIC21.05■□□□□ 0.96
CCL3P10147 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCL3P10147 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL3P10147 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CCL3P10147 AC135731.1-201ENST00000569415 2548 ntBASIC21.05■□□□□ 0.96
CCL3P10147 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL3P10147 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCL3P10147 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCL3P10147 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCL3P10147 AC131281.2-201ENST00000520478 145 ntBASIC21.04■□□□□ 0.96
CCL3P10147 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCL3P10147 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCL3P10147 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCL3P10147 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCL3P10147 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCL3P10147 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CCL3P10147 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCL3P10147 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCL3P10147 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.03■□□□□ 0.96
CCL3P10147 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.03■□□□□ 0.96
CCL3P10147 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.03■□□□□ 0.96
CCL3P10147 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.02■□□□□ 0.96
CCL3P10147 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCL3P10147 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCL3P10147 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCL3P10147 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.02■□□□□ 0.96
CCL3P10147 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCL3P10147 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL3P10147 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCL3P10147 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.01■□□□□ 0.95
CCL3P10147 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCL3P10147 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.01■□□□□ 0.95
CCL3P10147 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL3P10147 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.01■□□□□ 0.95
CCL3P10147 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL3P10147 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL3P10147 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.01■□□□□ 0.95
CCL3P10147 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL3P10147 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCL3P10147 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCL3P10147 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCL3P10147 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CCL3P10147 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CCL3P10147 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCL3P10147 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21■□□□□ 0.95
CCL3P10147 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCL3P10147 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21■□□□□ 0.95
CCL3P10147 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21■□□□□ 0.95
CCL3P10147 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.99■□□□□ 0.95
CCL3P10147 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.99■□□□□ 0.95
CCL3P10147 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCL3P10147 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL3P10147 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCL3P10147 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CCL3P10147 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL3P10147 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL3P10147 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.99■□□□□ 0.95
CCL3P10147 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCL3P10147 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.99■□□□□ 0.95
CCL3P10147 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCL3P10147 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL3P10147 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.99■□□□□ 0.95
CCL3P10147 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCL3P10147 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCL3P10147 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.98■□□□□ 0.95
CCL3P10147 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.98■□□□□ 0.95
CCL3P10147 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.98■□□□□ 0.95
CCL3P10147 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.98■□□□□ 0.95
CCL3P10147 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.98■□□□□ 0.95
CCL3P10147 AC005703.6-201ENST00000623265 1329 ntBASIC20.98■□□□□ 0.95
CCL3P10147 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.98■□□□□ 0.95
CCL3P10147 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCL3P10147 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL3P10147 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCL3P10147 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL3P10147 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CCL3P10147 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.97■□□□□ 0.95
CCL3P10147 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms