Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P04436 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P04436 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P04436 HLA-L-211ENST00000482052 1765 ntBASIC21.05■□□□□ 0.96
P04436 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P04436 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04436 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04436 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04436 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
P04436 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.04■□□□□ 0.96
P04436 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
P04436 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.04■□□□□ 0.96
P04436 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04436 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04436 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
P04436 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04436 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
P04436 AC142381.3-201ENST00000568208 1670 ntBASIC21.03■□□□□ 0.96
P04436 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
P04436 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.03■□□□□ 0.96
P04436 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P04436 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.03■□□□□ 0.96
P04436 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.03■□□□□ 0.96
P04436 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
P04436 AC005703.6-201ENST00000623265 1329 ntBASIC21.03■□□□□ 0.96
P04436 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P04436 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
P04436 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P04436 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
P04436 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.02■□□□□ 0.96
P04436 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
P04436 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P04436 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
P04436 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
P04436 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P04436 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.01■□□□□ 0.95
P04436 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.01■□□□□ 0.95
P04436 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
P04436 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P04436 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
P04436 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
P04436 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P04436 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P04436 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.01■□□□□ 0.95
P04436 AL161729.1-201ENST00000604104 1402 ntBASIC21.01■□□□□ 0.95
P04436 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P04436 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.01■□□□□ 0.95
P04436 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
P04436 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21■□□□□ 0.95
P04436 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
P04436 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
P04436 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21■□□□□ 0.95
P04436 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21■□□□□ 0.95
P04436 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21■□□□□ 0.95
P04436 AC131281.2-201ENST00000520478 145 ntBASIC21■□□□□ 0.95
P04436 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21■□□□□ 0.95
P04436 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P04436 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21■□□□□ 0.95
P04436 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
P04436 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
P04436 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
P04436 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P04436 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.99■□□□□ 0.95
P04436 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.99■□□□□ 0.95
P04436 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
P04436 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P04436 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P04436 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.99■□□□□ 0.95
P04436 AC020928.2-201ENST00000588717 2197 ntBASIC20.99■□□□□ 0.95
P04436 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P04436 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
P04436 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P04436 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.98■□□□□ 0.95
P04436 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
P04436 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.98■□□□□ 0.95
P04436 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P04436 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
P04436 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
P04436 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04436 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04436 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04436 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.97■□□□□ 0.95
P04436 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
P04436 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04436 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.97■□□□□ 0.95
P04436 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.97■□□□□ 0.95
P04436 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.97■□□□□ 0.95
P04436 AC138932.3-201ENST00000567634 1902 ntBASIC20.97■□□□□ 0.95
P04436 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04436 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.97■□□□□ 0.95
P04436 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P04436 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
P04436 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
P04436 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04436 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04436 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
P04436 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
P04436 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.96■□□□□ 0.95
P04436 AL136116.3-201ENST00000402907 1138 ntBASIC20.96■□□□□ 0.95
P04436 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms