Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.63□□□□□ -0.07
APOBP04114 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.63□□□□□ -0.07
APOBP04114 LBH-205ENST00000407930 756 ntTSL 2 BASIC14.63□□□□□ -0.07
APOBP04114 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.63□□□□□ -0.07
APOBP04114 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOBP04114 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOBP04114 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOBP04114 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
APOBP04114 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
APOBP04114 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.63□□□□□ -0.07
APOBP04114 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.63□□□□□ -0.07
APOBP04114 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
APOBP04114 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
APOBP04114 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.62□□□□□ -0.07
APOBP04114 AC027612.3-201ENST00000413684 1047 ntBASIC14.62□□□□□ -0.07
APOBP04114 AC008764.7-201ENST00000593779 1081 ntBASIC14.62□□□□□ -0.07
APOBP04114 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
APOBP04114 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
APOBP04114 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC14.62□□□□□ -0.07
APOBP04114 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.62□□□□□ -0.07
APOBP04114 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
APOBP04114 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOBP04114 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.61□□□□□ -0.07
APOBP04114 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
APOBP04114 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBP04114 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBP04114 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
APOBP04114 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOBP04114 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC14.61□□□□□ -0.07
APOBP04114 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.61□□□□□ -0.07
APOBP04114 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
APOBP04114 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
APOBP04114 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.61□□□□□ -0.07
APOBP04114 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBP04114 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
APOBP04114 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
APOBP04114 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
APOBP04114 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOBP04114 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC14.6□□□□□ -0.07
APOBP04114 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC14.6□□□□□ -0.07
APOBP04114 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC14.6□□□□□ -0.07
APOBP04114 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.6□□□□□ -0.07
APOBP04114 TERF1P2-201ENST00000583350 1212 ntBASIC14.6□□□□□ -0.07
APOBP04114 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
APOBP04114 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.6□□□□□ -0.07
APOBP04114 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOBP04114 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOBP04114 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.59□□□□□ -0.07
APOBP04114 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC14.59□□□□□ -0.07
APOBP04114 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC14.59□□□□□ -0.07
APOBP04114 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.59□□□□□ -0.07
APOBP04114 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.59□□□□□ -0.07
APOBP04114 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOBP04114 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
APOBP04114 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOBP04114 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOBP04114 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC14.59□□□□□ -0.07
APOBP04114 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOBP04114 CDCA4P2-201ENST00000441182 718 ntBASIC14.59□□□□□ -0.07
APOBP04114 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
APOBP04114 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
APOBP04114 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
APOBP04114 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
APOBP04114 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.58□□□□□ -0.07
APOBP04114 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
APOBP04114 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
APOBP04114 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOBP04114 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.58□□□□□ -0.08
APOBP04114 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOBP04114 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
APOBP04114 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
APOBP04114 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOBP04114 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOBP04114 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
APOBP04114 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
APOBP04114 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.58□□□□□ -0.08
APOBP04114 ST7-202ENST00000323984 2142 ntTSL 5 BASIC14.57□□□□□ -0.08
APOBP04114 ST7-207ENST00000393449 2127 ntTSL 5 BASIC14.57□□□□□ -0.08
APOBP04114 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
APOBP04114 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.57□□□□□ -0.08
APOBP04114 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOBP04114 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOBP04114 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOBP04114 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOBP04114 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.57□□□□□ -0.08
APOBP04114 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOBP04114 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.57□□□□□ -0.08
APOBP04114 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOBP04114 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC14.57□□□□□ -0.08
APOBP04114 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.57□□□□□ -0.08
APOBP04114 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOBP04114 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC14.57□□□□□ -0.08
APOBP04114 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOBP04114 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
APOBP04114 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC14.57□□□□□ -0.08
APOBP04114 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.57□□□□□ -0.08
APOBP04114 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.57□□□□□ -0.08
APOBP04114 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC14.57□□□□□ -0.08
APOBP04114 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.57□□□□□ -0.08
APOBP04114 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms