Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CPNE3O75131 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.98■■□□□ 1.11
CPNE3O75131 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.98■■□□□ 1.11
CPNE3O75131 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.98■■□□□ 1.11
CPNE3O75131 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CPNE3O75131 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPNE3O75131 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CPNE3O75131 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.97■■□□□ 1.11
CPNE3O75131 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CPNE3O75131 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.97■■□□□ 1.11
CPNE3O75131 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.97■■□□□ 1.11
CPNE3O75131 AL139246.5-201ENST00000606645 996 ntBASIC21.97■■□□□ 1.11
CPNE3O75131 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.97■■□□□ 1.11
CPNE3O75131 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CPNE3O75131 AC093323.1-202ENST00000635031 2045 ntBASIC21.97■■□□□ 1.11
CPNE3O75131 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPNE3O75131 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE3O75131 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE3O75131 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.96■■□□□ 1.11
CPNE3O75131 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.96■■□□□ 1.11
CPNE3O75131 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CPNE3O75131 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.96■■□□□ 1.11
CPNE3O75131 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE3O75131 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE3O75131 AL512631.2-201ENST00000604634 923 ntBASIC21.96■■□□□ 1.11
CPNE3O75131 MIR4466-201ENST00000606121 54 ntBASIC21.96■■□□□ 1.11
CPNE3O75131 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.96■■□□□ 1.11
CPNE3O75131 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPNE3O75131 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE3O75131 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE3O75131 AC004448.1-201ENST00000458332 883 ntBASIC21.95■■□□□ 1.1
CPNE3O75131 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.95■■□□□ 1.1
CPNE3O75131 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE3O75131 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE3O75131 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
CPNE3O75131 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.94■■□□□ 1.1
CPNE3O75131 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE3O75131 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CPNE3O75131 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CPNE3O75131 SLC6A10P-202ENST00000431994 2058 ntBASIC21.94■■□□□ 1.1
CPNE3O75131 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE3O75131 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.94■■□□□ 1.1
CPNE3O75131 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.94■■□□□ 1.1
CPNE3O75131 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.94■■□□□ 1.1
CPNE3O75131 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.94■■□□□ 1.1
CPNE3O75131 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.94■■□□□ 1.1
CPNE3O75131 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE3O75131 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE3O75131 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
CPNE3O75131 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.93■■□□□ 1.1
CPNE3O75131 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.93■■□□□ 1.1
CPNE3O75131 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE3O75131 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE3O75131 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE3O75131 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE3O75131 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.92■■□□□ 1.1
CPNE3O75131 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE3O75131 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE3O75131 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE3O75131 MIR638-201ENST00000385237 100 ntBASIC21.92■■□□□ 1.1
CPNE3O75131 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CPNE3O75131 MIR6089-201ENST00000616698 64 ntBASIC21.92■■□□□ 1.1
CPNE3O75131 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE3O75131 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.91■■□□□ 1.1
CPNE3O75131 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CPNE3O75131 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE3O75131 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.91■■□□□ 1.1
CPNE3O75131 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE3O75131 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE3O75131 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE3O75131 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE3O75131 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE3O75131 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE3O75131 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE3O75131 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE3O75131 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE3O75131 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE3O75131 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.9■■□□□ 1.1
CPNE3O75131 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE3O75131 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.9■■□□□ 1.1
CPNE3O75131 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE3O75131 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.9■■□□□ 1.1
CPNE3O75131 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.9■■□□□ 1.1
CPNE3O75131 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPNE3O75131 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.89■■□□□ 1.09
CPNE3O75131 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE3O75131 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE3O75131 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE3O75131 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CPNE3O75131 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.89■■□□□ 1.09
CPNE3O75131 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
CPNE3O75131 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE3O75131 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE3O75131 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE3O75131 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE3O75131 AC096631.2-201ENST00000436136 790 ntBASIC21.88■■□□□ 1.09
CPNE3O75131 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.88■■□□□ 1.09
CPNE3O75131 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.88■■□□□ 1.09
CPNE3O75131 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
CPNE3O75131 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms