Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CXCL13O43927 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CXCL13O43927 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.62■□□□□ 0.89
CXCL13O43927 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.61■□□□□ 0.89
CXCL13O43927 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL13O43927 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.61■□□□□ 0.89
CXCL13O43927 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL13O43927 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL13O43927 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CXCL13O43927 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.61■□□□□ 0.89
CXCL13O43927 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.61■□□□□ 0.89
CXCL13O43927 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL13O43927 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.61■□□□□ 0.89
CXCL13O43927 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CXCL13O43927 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL13O43927 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CXCL13O43927 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL13O43927 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CXCL13O43927 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.6■□□□□ 0.89
CXCL13O43927 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL13O43927 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL13O43927 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL13O43927 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL13O43927 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL13O43927 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL13O43927 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL13O43927 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.6■□□□□ 0.89
CXCL13O43927 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.6■□□□□ 0.89
CXCL13O43927 AC131212.1-201ENST00000613771 668 ntBASIC20.6■□□□□ 0.89
CXCL13O43927 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.6■□□□□ 0.89
CXCL13O43927 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.6■□□□□ 0.89
CXCL13O43927 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CXCL13O43927 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL13O43927 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL13O43927 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL13O43927 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL13O43927 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXCL13O43927 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CXCL13O43927 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CXCL13O43927 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CXCL13O43927 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.59■□□□□ 0.89
CXCL13O43927 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CXCL13O43927 MIR6722-201ENST00000617286 78 ntBASIC20.59■□□□□ 0.89
CXCL13O43927 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CXCL13O43927 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CXCL13O43927 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CXCL13O43927 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.58■□□□□ 0.89
CXCL13O43927 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.58■□□□□ 0.89
CXCL13O43927 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CXCL13O43927 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.58■□□□□ 0.89
CXCL13O43927 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CXCL13O43927 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CXCL13O43927 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.57■□□□□ 0.88
CXCL13O43927 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.57■□□□□ 0.88
CXCL13O43927 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXCL13O43927 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.57■□□□□ 0.88
CXCL13O43927 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.57■□□□□ 0.88
CXCL13O43927 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.57■□□□□ 0.88
CXCL13O43927 MIR6724-1-201ENST00000616420 92 ntBASIC20.57■□□□□ 0.88
CXCL13O43927 MIR6724-2-201ENST00000616483 92 ntBASIC20.57■□□□□ 0.88
CXCL13O43927 MIR6724-4-201ENST00000617390 92 ntBASIC20.57■□□□□ 0.88
CXCL13O43927 MIR6724-3-201ENST00000622482 92 ntBASIC20.57■□□□□ 0.88
CXCL13O43927 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CXCL13O43927 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXCL13O43927 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXCL13O43927 AL139125.2-201ENST00000623134 1869 ntBASIC20.56■□□□□ 0.88
CXCL13O43927 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXCL13O43927 LINC01124-201ENST00000409786 2117 ntBASIC20.56■□□□□ 0.88
CXCL13O43927 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CXCL13O43927 AL161729.1-201ENST00000604104 1402 ntBASIC20.56■□□□□ 0.88
CXCL13O43927 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.56■□□□□ 0.88
CXCL13O43927 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CXCL13O43927 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CXCL13O43927 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CXCL13O43927 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.56■□□□□ 0.88
CXCL13O43927 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CXCL13O43927 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.56■□□□□ 0.88
CXCL13O43927 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.56■□□□□ 0.88
CXCL13O43927 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CXCL13O43927 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.56■□□□□ 0.88
CXCL13O43927 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXCL13O43927 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.55■□□□□ 0.88
CXCL13O43927 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.55■□□□□ 0.88
CXCL13O43927 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.55■□□□□ 0.88
CXCL13O43927 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.55■□□□□ 0.88
CXCL13O43927 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.55■□□□□ 0.88
CXCL13O43927 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CXCL13O43927 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CXCL13O43927 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CXCL13O43927 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXCL13O43927 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CXCL13O43927 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CXCL13O43927 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.54■□□□□ 0.88
CXCL13O43927 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.54■□□□□ 0.88
CXCL13O43927 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.54■□□□□ 0.88
CXCL13O43927 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CXCL13O43927 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CXCL13O43927 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CXCL13O43927 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CXCL13O43927 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms