Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
CHMP2AO43633 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CHMP2AO43633 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.91■■□□□ 1.74
CHMP2AO43633 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP2AO43633 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.91■■□□□ 1.74
CHMP2AO43633 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
CHMP2AO43633 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP2AO43633 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP2AO43633 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.91■■□□□ 1.74
CHMP2AO43633 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
CHMP2AO43633 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP2AO43633 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP2AO43633 AL022069.1-201ENST00000568025 1636 ntBASIC25.91■■□□□ 1.74
CHMP2AO43633 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP2AO43633 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
CHMP2AO43633 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CHMP2AO43633 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.9■■□□□ 1.74
CHMP2AO43633 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.9■■□□□ 1.74
CHMP2AO43633 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHMP2AO43633 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.9■■□□□ 1.74
CHMP2AO43633 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.9■■□□□ 1.74
CHMP2AO43633 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.9■■□□□ 1.74
CHMP2AO43633 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.9■■□□□ 1.74
CHMP2AO43633 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
CHMP2AO43633 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
CHMP2AO43633 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
CHMP2AO43633 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHMP2AO43633 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CHMP2AO43633 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.89■■□□□ 1.74
CHMP2AO43633 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.89■■□□□ 1.74
CHMP2AO43633 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
CHMP2AO43633 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CHMP2AO43633 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CHMP2AO43633 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.89■■□□□ 1.73
CHMP2AO43633 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
CHMP2AO43633 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CHMP2AO43633 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CHMP2AO43633 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.88■■□□□ 1.73
CHMP2AO43633 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.88■■□□□ 1.73
CHMP2AO43633 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.88■■□□□ 1.73
CHMP2AO43633 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP2AO43633 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CHMP2AO43633 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.88■■□□□ 1.73
CHMP2AO43633 MIR6724-1-201ENST00000616420 92 ntBASIC25.88■■□□□ 1.73
CHMP2AO43633 MIR6724-2-201ENST00000616483 92 ntBASIC25.88■■□□□ 1.73
CHMP2AO43633 MIR6724-4-201ENST00000617390 92 ntBASIC25.88■■□□□ 1.73
CHMP2AO43633 MIR6724-3-201ENST00000622482 92 ntBASIC25.88■■□□□ 1.73
CHMP2AO43633 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
CHMP2AO43633 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.88■■□□□ 1.73
CHMP2AO43633 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
CHMP2AO43633 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.87■■□□□ 1.73
CHMP2AO43633 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.87■■□□□ 1.73
CHMP2AO43633 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
CHMP2AO43633 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.87■■□□□ 1.73
CHMP2AO43633 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.87■■□□□ 1.73
CHMP2AO43633 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.87■■□□□ 1.73
CHMP2AO43633 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
CHMP2AO43633 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.87■■□□□ 1.73
CHMP2AO43633 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CHMP2AO43633 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CHMP2AO43633 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.86■■□□□ 1.73
CHMP2AO43633 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.86■■□□□ 1.73
CHMP2AO43633 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHMP2AO43633 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHMP2AO43633 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHMP2AO43633 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CHMP2AO43633 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CHMP2AO43633 MIR6722-201ENST00000617286 78 ntBASIC25.85■■□□□ 1.73
CHMP2AO43633 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CHMP2AO43633 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
CHMP2AO43633 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CHMP2AO43633 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.84■■□□□ 1.73
CHMP2AO43633 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CHMP2AO43633 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CHMP2AO43633 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.84■■□□□ 1.73
CHMP2AO43633 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CHMP2AO43633 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CHMP2AO43633 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.83■■□□□ 1.73
CHMP2AO43633 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CHMP2AO43633 AL117332.1-201ENST00000622628 974 ntBASIC25.83■■□□□ 1.73
CHMP2AO43633 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHMP2AO43633 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
CHMP2AO43633 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.83■■□□□ 1.72
CHMP2AO43633 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.82■■□□□ 1.72
CHMP2AO43633 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CHMP2AO43633 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.82■■□□□ 1.72
CHMP2AO43633 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.82■■□□□ 1.72
CHMP2AO43633 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CHMP2AO43633 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.82■■□□□ 1.72
CHMP2AO43633 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.81■■□□□ 1.72
CHMP2AO43633 LINC01124-201ENST00000409786 2117 ntBASIC25.81■■□□□ 1.72
CHMP2AO43633 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.81■■□□□ 1.72
CHMP2AO43633 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.81■■□□□ 1.72
CHMP2AO43633 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.81■■□□□ 1.72
CHMP2AO43633 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CHMP2AO43633 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHMP2AO43633 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
CHMP2AO43633 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.8■■□□□ 1.72
CHMP2AO43633 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.8■■□□□ 1.72
CHMP2AO43633 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms