Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CASQ2O14958 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CASQ2O14958 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CASQ2O14958 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CASQ2O14958 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CASQ2O14958 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.85■■□□□ 1.09
CASQ2O14958 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CASQ2O14958 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CASQ2O14958 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CASQ2O14958 AC007375.3-201ENST00000600936 2314 ntBASIC21.84■■□□□ 1.09
CASQ2O14958 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CASQ2O14958 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CASQ2O14958 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
CASQ2O14958 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CASQ2O14958 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.84■■□□□ 1.09
CASQ2O14958 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CASQ2O14958 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CASQ2O14958 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CASQ2O14958 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CASQ2O14958 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.83■■□□□ 1.09
CASQ2O14958 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CASQ2O14958 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CASQ2O14958 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.83■■□□□ 1.09
CASQ2O14958 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.83■■□□□ 1.09
CASQ2O14958 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CASQ2O14958 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CASQ2O14958 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.83■■□□□ 1.08
CASQ2O14958 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CASQ2O14958 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CASQ2O14958 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASQ2O14958 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASQ2O14958 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASQ2O14958 HLA-L-211ENST00000482052 1765 ntBASIC21.82■■□□□ 1.08
CASQ2O14958 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CASQ2O14958 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CASQ2O14958 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CASQ2O14958 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CASQ2O14958 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASQ2O14958 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASQ2O14958 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASQ2O14958 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASQ2O14958 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CASQ2O14958 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CASQ2O14958 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASQ2O14958 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CASQ2O14958 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CASQ2O14958 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CASQ2O14958 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CASQ2O14958 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CASQ2O14958 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CASQ2O14958 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CASQ2O14958 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CASQ2O14958 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CASQ2O14958 DUSP8P3-201ENST00000399571 1760 ntBASIC21.8■■□□□ 1.08
CASQ2O14958 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.8■■□□□ 1.08
CASQ2O14958 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CASQ2O14958 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CASQ2O14958 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CASQ2O14958 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CASQ2O14958 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CASQ2O14958 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.79■■□□□ 1.08
CASQ2O14958 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CASQ2O14958 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CASQ2O14958 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CASQ2O14958 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CASQ2O14958 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CASQ2O14958 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CASQ2O14958 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
CASQ2O14958 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CASQ2O14958 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASQ2O14958 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
CASQ2O14958 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASQ2O14958 AC097358.2-201ENST00000607541 1159 ntBASIC21.78■■□□□ 1.08
CASQ2O14958 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CASQ2O14958 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CASQ2O14958 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CASQ2O14958 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CASQ2O14958 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.77■■□□□ 1.08
CASQ2O14958 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CASQ2O14958 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CASQ2O14958 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.77■■□□□ 1.08
CASQ2O14958 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CASQ2O14958 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CASQ2O14958 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CASQ2O14958 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CASQ2O14958 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CASQ2O14958 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CASQ2O14958 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CASQ2O14958 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CASQ2O14958 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CASQ2O14958 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CASQ2O14958 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.76■■□□□ 1.07
CASQ2O14958 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.76■■□□□ 1.07
CASQ2O14958 ANOS2P-203ENST00000472227 1816 ntBASIC21.76■■□□□ 1.07
CASQ2O14958 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CASQ2O14958 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CASQ2O14958 FOXO3B-201ENST00000395675 1928 ntBASIC21.75■■□□□ 1.07
CASQ2O14958 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CASQ2O14958 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.75■■□□□ 1.07
CASQ2O14958 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms