Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MBD3L4A6NDZ8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.39■□□□□ 0.86
MBD3L4A6NDZ8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
MBD3L4A6NDZ8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.39■□□□□ 0.85
MBD3L4A6NDZ8 AL161729.1-201ENST00000604104 1402 ntBASIC20.39■□□□□ 0.85
MBD3L4A6NDZ8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MBD3L4A6NDZ8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MBD3L4A6NDZ8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.39■□□□□ 0.85
MBD3L4A6NDZ8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
MBD3L4A6NDZ8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.38■□□□□ 0.85
MBD3L4A6NDZ8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.38■□□□□ 0.85
MBD3L4A6NDZ8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.38■□□□□ 0.85
MBD3L4A6NDZ8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3L4A6NDZ8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MBD3L4A6NDZ8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3L4A6NDZ8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
MBD3L4A6NDZ8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD3L4A6NDZ8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.37■□□□□ 0.85
MBD3L4A6NDZ8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
MBD3L4A6NDZ8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3L4A6NDZ8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.37■□□□□ 0.85
MBD3L4A6NDZ8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3L4A6NDZ8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
MBD3L4A6NDZ8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MBD3L4A6NDZ8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.37■□□□□ 0.85
MBD3L4A6NDZ8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
MBD3L4A6NDZ8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.36■□□□□ 0.85
MBD3L4A6NDZ8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MBD3L4A6NDZ8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MBD3L4A6NDZ8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MBD3L4A6NDZ8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MBD3L4A6NDZ8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MBD3L4A6NDZ8 AC005837.3-201ENST00000612163 286 ntBASIC20.36■□□□□ 0.85
MBD3L4A6NDZ8 AC106739.1-201ENST00000617035 715 ntBASIC20.36■□□□□ 0.85
MBD3L4A6NDZ8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
MBD3L4A6NDZ8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3L4A6NDZ8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD3L4A6NDZ8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.35■□□□□ 0.85
MBD3L4A6NDZ8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3L4A6NDZ8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.35■□□□□ 0.85
MBD3L4A6NDZ8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD3L4A6NDZ8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3L4A6NDZ8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
MBD3L4A6NDZ8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3L4A6NDZ8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MBD3L4A6NDZ8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.34■□□□□ 0.85
MBD3L4A6NDZ8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3L4A6NDZ8 HLA-L-211ENST00000482052 1765 ntBASIC20.34■□□□□ 0.85
MBD3L4A6NDZ8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MBD3L4A6NDZ8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.34■□□□□ 0.85
MBD3L4A6NDZ8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.34■□□□□ 0.85
MBD3L4A6NDZ8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3L4A6NDZ8 UNC93B3-201ENST00000308076 687 ntBASIC20.34■□□□□ 0.85
MBD3L4A6NDZ8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MBD3L4A6NDZ8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3L4A6NDZ8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3L4A6NDZ8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.34■□□□□ 0.85
MBD3L4A6NDZ8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
MBD3L4A6NDZ8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MBD3L4A6NDZ8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.33■□□□□ 0.85
MBD3L4A6NDZ8 PBX2P1-201ENST00000493219 1291 ntBASIC20.33■□□□□ 0.85
MBD3L4A6NDZ8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.33■□□□□ 0.85
MBD3L4A6NDZ8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MBD3L4A6NDZ8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.33■□□□□ 0.85
MBD3L4A6NDZ8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.33■□□□□ 0.84
MBD3L4A6NDZ8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MBD3L4A6NDZ8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
MBD3L4A6NDZ8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3L4A6NDZ8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3L4A6NDZ8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3L4A6NDZ8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3L4A6NDZ8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.32■□□□□ 0.84
MBD3L4A6NDZ8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3L4A6NDZ8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3L4A6NDZ8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.32■□□□□ 0.84
MBD3L4A6NDZ8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 DUX4L19-201ENST00000557448 1267 ntBASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 AL136162.1-201ENST00000607711 1078 ntBASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3L4A6NDZ8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3L4A6NDZ8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.3■□□□□ 0.84
MBD3L4A6NDZ8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3L4A6NDZ8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.3■□□□□ 0.84
MBD3L4A6NDZ8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3L4A6NDZ8 AC092171.4-201ENST00000609130 632 ntBASIC20.3■□□□□ 0.84
MBD3L4A6NDZ8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
MBD3L4A6NDZ8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MBD3L4A6NDZ8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms