Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCRBV9S1A1TA0A576 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
TCRBV9S1A1TA0A576 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TCRBV9S1A1TA0A576 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.19■■□□□ 1.3
TCRBV9S1A1TA0A576 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TCRBV9S1A1TA0A576 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV9S1A1TA0A576 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV9S1A1TA0A576 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.18■■□□□ 1.3
TCRBV9S1A1TA0A576 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV9S1A1TA0A576 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV9S1A1TA0A576 AC087393.1-201ENST00000582896 145 ntBASIC23.18■■□□□ 1.3
TCRBV9S1A1TA0A576 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.18■■□□□ 1.3
TCRBV9S1A1TA0A576 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.18■■□□□ 1.3
TCRBV9S1A1TA0A576 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TCRBV9S1A1TA0A576 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV9S1A1TA0A576 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV9S1A1TA0A576 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TCRBV9S1A1TA0A576 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.17■■□□□ 1.3
TCRBV9S1A1TA0A576 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.17■■□□□ 1.3
TCRBV9S1A1TA0A576 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.17■■□□□ 1.3
TCRBV9S1A1TA0A576 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV9S1A1TA0A576 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.17■■□□□ 1.3
TCRBV9S1A1TA0A576 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV9S1A1TA0A576 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV9S1A1TA0A576 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TCRBV9S1A1TA0A576 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.16■■□□□ 1.3
TCRBV9S1A1TA0A576 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.16■■□□□ 1.3
TCRBV9S1A1TA0A576 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV9S1A1TA0A576 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV9S1A1TA0A576 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV9S1A1TA0A576 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV9S1A1TA0A576 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV9S1A1TA0A576 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TCRBV9S1A1TA0A576 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCRBV9S1A1TA0A576 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TCRBV9S1A1TA0A576 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TCRBV9S1A1TA0A576 AL592295.1-201ENST00000400984 884 ntBASIC23.15■■□□□ 1.3
TCRBV9S1A1TA0A576 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.15■■□□□ 1.3
TCRBV9S1A1TA0A576 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TCRBV9S1A1TA0A576 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.15■■□□□ 1.3
TCRBV9S1A1TA0A576 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCRBV9S1A1TA0A576 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
TCRBV9S1A1TA0A576 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TCRBV9S1A1TA0A576 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.15■■□□□ 1.3
TCRBV9S1A1TA0A576 ANOS2P-203ENST00000472227 1816 ntBASIC23.15■■□□□ 1.3
TCRBV9S1A1TA0A576 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TCRBV9S1A1TA0A576 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TCRBV9S1A1TA0A576 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 AC079834.2-201ENST00000609776 1949 ntBASIC23.14■■□□□ 1.29
TCRBV9S1A1TA0A576 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TCRBV9S1A1TA0A576 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TCRBV9S1A1TA0A576 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.13■■□□□ 1.29
TCRBV9S1A1TA0A576 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
TCRBV9S1A1TA0A576 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
TCRBV9S1A1TA0A576 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
TCRBV9S1A1TA0A576 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.13■■□□□ 1.29
TCRBV9S1A1TA0A576 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
TCRBV9S1A1TA0A576 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 AL161729.1-201ENST00000604104 1402 ntBASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 MIR6765-201ENST00000614092 87 ntBASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
TCRBV9S1A1TA0A576 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TCRBV9S1A1TA0A576 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.11■■□□□ 1.29
TCRBV9S1A1TA0A576 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
TCRBV9S1A1TA0A576 DUX4L9-201ENST00000449051 1259 ntBASIC23.11■■□□□ 1.29
TCRBV9S1A1TA0A576 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TCRBV9S1A1TA0A576 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
TCRBV9S1A1TA0A576 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.11■■□□□ 1.29
TCRBV9S1A1TA0A576 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.11■■□□□ 1.29
TCRBV9S1A1TA0A576 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
TCRBV9S1A1TA0A576 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TCRBV9S1A1TA0A576 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.1■■□□□ 1.29
TCRBV9S1A1TA0A576 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
TCRBV9S1A1TA0A576 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms