Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV25A0A0B4J276 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV25A0A0B4J276 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV25A0A0B4J276 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV25A0A0B4J276 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV25A0A0B4J276 KRT16P3-201ENST00000439127 1283 ntBASIC17.29■□□□□ 0.36
TRAV25A0A0B4J276 UNC93B8-201ENST00000511903 705 ntBASIC17.29■□□□□ 0.36
TRAV25A0A0B4J276 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TRAV25A0A0B4J276 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV25A0A0B4J276 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV25A0A0B4J276 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV25A0A0B4J276 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV25A0A0B4J276 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV25A0A0B4J276 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV25A0A0B4J276 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRAV25A0A0B4J276 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV25A0A0B4J276 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.28■□□□□ 0.36
TRAV25A0A0B4J276 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV25A0A0B4J276 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV25A0A0B4J276 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV25A0A0B4J276 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV25A0A0B4J276 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRAV25A0A0B4J276 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV25A0A0B4J276 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV25A0A0B4J276 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRAV25A0A0B4J276 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV25A0A0B4J276 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV25A0A0B4J276 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAV25A0A0B4J276 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV25A0A0B4J276 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.27■□□□□ 0.35
TRAV25A0A0B4J276 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TRAV25A0A0B4J276 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV25A0A0B4J276 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 AL356441.2-201ENST00000443009 864 ntBASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 MIR6724-1-201ENST00000616420 92 ntBASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 MIR6724-2-201ENST00000616483 92 ntBASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 MIR6724-4-201ENST00000617390 92 ntBASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 MIR6724-3-201ENST00000622482 92 ntBASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAV25A0A0B4J276 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV25A0A0B4J276 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV25A0A0B4J276 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV25A0A0B4J276 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV25A0A0B4J276 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV25A0A0B4J276 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV25A0A0B4J276 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV25A0A0B4J276 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV25A0A0B4J276 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV25A0A0B4J276 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAV25A0A0B4J276 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV25A0A0B4J276 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV25A0A0B4J276 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.24■□□□□ 0.35
TRAV25A0A0B4J276 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRAV25A0A0B4J276 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 AC005703.6-201ENST00000623265 1329 ntBASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV25A0A0B4J276 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV25A0A0B4J276 LINC00543-201ENST00000567234 1845 ntBASIC17.22■□□□□ 0.35
TRAV25A0A0B4J276 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV25A0A0B4J276 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV25A0A0B4J276 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV25A0A0B4J276 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV25A0A0B4J276 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms