Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV34A0A0B4J273 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV34A0A0B4J273 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV34A0A0B4J273 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV34A0A0B4J273 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRAV34A0A0B4J273 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV34A0A0B4J273 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TRAV34A0A0B4J273 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV34A0A0B4J273 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV34A0A0B4J273 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV34A0A0B4J273 AL117328.2-201ENST00000624617 1940 ntBASIC17.66■□□□□ 0.42
TRAV34A0A0B4J273 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV34A0A0B4J273 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV34A0A0B4J273 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV34A0A0B4J273 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV34A0A0B4J273 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV34A0A0B4J273 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRAV34A0A0B4J273 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV34A0A0B4J273 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV34A0A0B4J273 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV34A0A0B4J273 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.66■□□□□ 0.42
TRAV34A0A0B4J273 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRAV34A0A0B4J273 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV34A0A0B4J273 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV34A0A0B4J273 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV34A0A0B4J273 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV34A0A0B4J273 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV34A0A0B4J273 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV34A0A0B4J273 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV34A0A0B4J273 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV34A0A0B4J273 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV34A0A0B4J273 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV34A0A0B4J273 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV34A0A0B4J273 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV34A0A0B4J273 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV34A0A0B4J273 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV34A0A0B4J273 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV34A0A0B4J273 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV34A0A0B4J273 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV34A0A0B4J273 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV34A0A0B4J273 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV34A0A0B4J273 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAV34A0A0B4J273 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV34A0A0B4J273 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAV34A0A0B4J273 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRAV34A0A0B4J273 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 EP400NL-214ENST00000641289 2402 ntBASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 AC233723.2-201ENST00000623798 2106 ntBASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
TRAV34A0A0B4J273 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRAV34A0A0B4J273 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV34A0A0B4J273 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRAV34A0A0B4J273 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TRAV34A0A0B4J273 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV34A0A0B4J273 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV34A0A0B4J273 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRAV34A0A0B4J273 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV34A0A0B4J273 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV34A0A0B4J273 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms