Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-1A0A0B4J245 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-1A0A0B4J245 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-1A0A0B4J245 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-1A0A0B4J245 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-1A0A0B4J245 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV12-1A0A0B4J245 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRAV12-1A0A0B4J245 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.14■□□□□ 0.18
TRAV12-1A0A0B4J245 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRAV12-1A0A0B4J245 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-1A0A0B4J245 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-1A0A0B4J245 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAV12-1A0A0B4J245 AC097358.2-201ENST00000607541 1159 ntBASIC16.14■□□□□ 0.17
TRAV12-1A0A0B4J245 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRAV12-1A0A0B4J245 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV12-1A0A0B4J245 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAV12-1A0A0B4J245 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-1A0A0B4J245 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV12-1A0A0B4J245 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-1A0A0B4J245 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-1A0A0B4J245 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-1A0A0B4J245 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-1A0A0B4J245 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-1A0A0B4J245 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV12-1A0A0B4J245 AL359258.2-201ENST00000564063 1566 ntBASIC16.12■□□□□ 0.17
TRAV12-1A0A0B4J245 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV12-1A0A0B4J245 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV12-1A0A0B4J245 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV12-1A0A0B4J245 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-1A0A0B4J245 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-1A0A0B4J245 AC242852.2-201ENST00000615738 1807 ntBASIC16.1■□□□□ 0.17
TRAV12-1A0A0B4J245 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-1A0A0B4J245 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV12-1A0A0B4J245 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV12-1A0A0B4J245 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAV12-1A0A0B4J245 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV12-1A0A0B4J245 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV12-1A0A0B4J245 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV12-1A0A0B4J245 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV12-1A0A0B4J245 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV12-1A0A0B4J245 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-1A0A0B4J245 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-1A0A0B4J245 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-1A0A0B4J245 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-1A0A0B4J245 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-1A0A0B4J245 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAV12-1A0A0B4J245 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-1A0A0B4J245 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRAV12-1A0A0B4J245 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-1A0A0B4J245 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-1A0A0B4J245 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-1A0A0B4J245 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV12-1A0A0B4J245 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV12-1A0A0B4J245 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TRAV12-1A0A0B4J245 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRAV12-1A0A0B4J245 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV12-1A0A0B4J245 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV12-1A0A0B4J245 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV12-1A0A0B4J245 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-1A0A0B4J245 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-1A0A0B4J245 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-1A0A0B4J245 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-1A0A0B4J245 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-1A0A0B4J245 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-1A0A0B4J245 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV12-1A0A0B4J245 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms