Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV8-1A0A0A6YYK1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-1A0A0A6YYK1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-1A0A0A6YYK1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV8-1A0A0A6YYK1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-1A0A0A6YYK1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-1A0A0A6YYK1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-1A0A0A6YYK1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRAV8-1A0A0A6YYK1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
TRAV8-1A0A0A6YYK1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-1A0A0A6YYK1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-1A0A0A6YYK1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV8-1A0A0A6YYK1 AC233723.2-201ENST00000623798 2106 ntBASIC17.41■□□□□ 0.38
TRAV8-1A0A0A6YYK1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TRAV8-1A0A0A6YYK1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TRAV8-1A0A0A6YYK1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV8-1A0A0A6YYK1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-1A0A0A6YYK1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-1A0A0A6YYK1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV8-1A0A0A6YYK1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRAV8-1A0A0A6YYK1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV8-1A0A0A6YYK1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV8-1A0A0A6YYK1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-1A0A0A6YYK1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRAV8-1A0A0A6YYK1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRAV8-1A0A0A6YYK1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV8-1A0A0A6YYK1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV8-1A0A0A6YYK1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.39■□□□□ 0.38
TRAV8-1A0A0A6YYK1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
TRAV8-1A0A0A6YYK1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV8-1A0A0A6YYK1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.39■□□□□ 0.38
TRAV8-1A0A0A6YYK1 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-1A0A0A6YYK1 EP400NL-214ENST00000641289 2402 ntBASIC17.39■□□□□ 0.37
TRAV8-1A0A0A6YYK1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV8-1A0A0A6YYK1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-1A0A0A6YYK1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV8-1A0A0A6YYK1 ECEL1P2-201ENST00000461596 1295 ntBASIC17.39■□□□□ 0.37
TRAV8-1A0A0A6YYK1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV8-1A0A0A6YYK1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.39■□□□□ 0.37
TRAV8-1A0A0A6YYK1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV8-1A0A0A6YYK1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-1A0A0A6YYK1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-1A0A0A6YYK1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV8-1A0A0A6YYK1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRAV8-1A0A0A6YYK1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-1A0A0A6YYK1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV8-1A0A0A6YYK1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.38■□□□□ 0.37
TRAV8-1A0A0A6YYK1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAV8-1A0A0A6YYK1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-1A0A0A6YYK1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-1A0A0A6YYK1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-1A0A0A6YYK1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAV8-1A0A0A6YYK1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-1A0A0A6YYK1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-1A0A0A6YYK1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-1A0A0A6YYK1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-1A0A0A6YYK1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV8-1A0A0A6YYK1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-1A0A0A6YYK1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV8-1A0A0A6YYK1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-1A0A0A6YYK1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 ANOS2P-203ENST00000472227 1816 ntBASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.36■□□□□ 0.37
TRAV8-1A0A0A6YYK1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-1A0A0A6YYK1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-1A0A0A6YYK1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-1A0A0A6YYK1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-1A0A0A6YYK1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.35■□□□□ 0.37
TRAV8-1A0A0A6YYK1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-1A0A0A6YYK1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV8-1A0A0A6YYK1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-1A0A0A6YYK1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV8-1A0A0A6YYK1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-1A0A0A6YYK1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV8-1A0A0A6YYK1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAV8-1A0A0A6YYK1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-1A0A0A6YYK1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms